RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 STK32BQ9NY57 414 aa5.08□□□□□ -1.6
CDC42BPA-213ENST00000488131 SEC63Q9UGP8 760 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-213ENST00000488131 POLR3KQ9Y2Y1 108 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-213ENST00000488131 ROBO2Q9HCK4 1378 aa5.08□□□□□ -1.6
CDC42BPA-213ENST00000488131 A0A0J9YVX5 310 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 SMIM31A0A1B0GVY4 71 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 TRIM49BA6NDI0 452 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 PGRMC1O00264 195 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 CETN3O15182 167 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 AKR1B10O60218 316 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 ZNF862O60290 1169 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 PFDN1O60925 122 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 PALMO75781 387 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 GFPT2O94808 682 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 RHOBTB3O94955 611 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 DEXIO95424 95 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 DDX58O95786 925 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 IGKV5-2P06315 115 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 LYNP07948 512 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 MAOBP27338 520 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 SMARCA1P28370 1054 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 PPP1R2P41236 205 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 SLC1A4P43007 532 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 PMS1P54277 932 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 YARSP54577 528 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 ATP2C1P98194 919 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 CLCQ05315 142 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 MGAT5Q09328 741 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 AP1B1Q10567 949 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 AP3B2Q13367 1082 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 ITGA9Q13797 1035 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 MPP2Q14168 576 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 MAP7Q14244 749 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 INPP5AQ14642 412 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 ADRM1Q16186 407 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 AKNAD1Q5T1N1 836 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 CGB2Q6NT52 195 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 TAOK1Q7L7X3 1001 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 REC114Q7Z4M0 266 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 C2CD5Q86YS7 1000 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 GIMAP8Q8ND71 665 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 SUPT20HQ8NEM7 779 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 LRRC8CQ8TDW0 803 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 NAP1L3Q99457 506 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 FMO2Q99518 471 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 UBAC1Q9BSL1 405 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 SSBP4Q9BWG4 385 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 EMILIN2Q9BXX0 1053 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 LY9Q9HBG7 655 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 OSGEPQ9NPF4 335 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 DDX21Q9NR30 783 aaKnown RBP eCLIP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 FGFR1OP2Q9NVK5 253 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 UTP6Q9NYH9 597 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 PTTG2Q9NZH5 202 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 LNPEPQ9UIQ6 1025 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 TTC7AQ9ULT0 858 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 ZNF148Q9UQR1 794 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 GDAQ9Y2T3 454 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 CD2APQ9Y5K6 639 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 ARFGEF2Q9Y6D5 1785 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 C5P01031 1676 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 BICDL2A1A5D9 508 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 GFRA2O00451 464 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 RGS16O15492 202 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 DAPK3O43293 454 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 TPD52L2O43399 206 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 FTCDO95954 541 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 ALDH2P05091 517 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 SPATA31D3P0C874 917 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 HARSP12081 509 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 ACADVLP49748 655 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 KLK7P49862 253 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 RASSF2P50749 326 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 POLGP54098 1239 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 DRG2P55039 364 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 HAND2P61296 217 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 POU4F3Q15319 338 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 PKN1Q16512 942 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 PPP2R5EQ16537 467 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 CLPPQ16740 277 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 SNX30Q5VWJ9 437 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 DENND2CQ68D51 928 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 PDXDC1Q6P996 788 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 SPATA31D4Q6ZUB0 917 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 MARK2Q7KZI7 788 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 CYB5R4Q7L1T6 521 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 MICU3Q86XE3 530 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 FBXO11Q86XK2 927 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 DDX42Q86XP3 938 aaKnown RBP eCLIP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 ECHDC2Q86YB7 292 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 KLHL7Q8IXQ5 586 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 NME8Q8N427 588 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 FAM169BQ8N8A8 192 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 ERMNQ8TAM6 284 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 IGDCC4Q8TDY8 1250 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 DIS3LQ8TF46 1054 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 NAT14Q8WUY8 206 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 CKAP2Q8WWK9 683 aa5.07□□□□□ -1.6
CDC42BPA-213ENST00000488131 WFDC12Q8WWY7 111 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms