RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 OR8K1Q8NGG5 319 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 CXorf38Q8TB03 319 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 SEMA4DQ92854 862 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 C18orf25Q96B23 403 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-242ENST00000488013 ZNF689Q96CS4 500 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-242ENST00000488013 PDLIM2Q96JY6 352 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 RAD9AQ99638 391 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.85□□□□□ -0.51
HDLBP-242ENST00000488013 XYLT2Q9H1B5 865 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 UBE2TQ9NPD8 197 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-242ENST00000488013 RNF19AQ9NV58 838 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 TUBGCP4Q9UGJ1 667 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 RWDD3Q9Y3V2 267 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 BZW2Q9Y6E2 419 aaKnown RBP11.85□□□□□ -0.51
HDLBP-242ENST00000488013 HUS1O60921 280 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 PTMAP06454 111 aaKnown RBP11.84□□□□□ -0.51
HDLBP-242ENST00000488013 PPM1AP35813 382 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 STAT1P42224 750 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 MAGEA10P43363 369 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-242ENST00000488013 AARSP49588 968 aaKnown RBP eCLIP11.84□□□□□ -0.51
HDLBP-242ENST00000488013 PSEN1P49768 467 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 LILRA4P59901 499 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 POLR2FP61218 127 aaKnown RBP11.84□□□□□ -0.51
HDLBP-242ENST00000488013 HTRA4P83105 476 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-242ENST00000488013 TBX2Q13207 712 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-242ENST00000488013 PDAP1Q13442 181 aaKnown RBP11.84□□□□□ -0.51
HDLBP-242ENST00000488013 BTG3Q14201 252 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-242ENST00000488013 RASIP1Q5U651 963 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 PHLDB3Q6NSJ2 640 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 HERC6Q8IVU3 1022 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 TMEM86AQ8N2M4 240 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 APPL2Q8NEU8 664 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 PPP1R9BQ96SB3 815 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 NAA15Q9BXJ9 866 aaKnown RBP11.84□□□□□ -0.51
HDLBP-242ENST00000488013 OXCT2Q9BYC2 517 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-242ENST00000488013 TTYH3Q9C0H2 523 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 GANQ9H2C0 597 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 MIOSQ9NXC5 875 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 DNAJC12Q9UKB3 198 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 PLAGL2Q9UPG8 496 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 FAN1Q9Y2M0 1017 aa11.84□□□□□ -0.51
HDLBP-242ENST00000488013 CASTOR2A6NHX0 329 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 TACC1O75410 805 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 TADA2AO75478 443 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 NOL4O94818 638 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 GYPCP04921 128 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 FERP16591 822 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 ANXA13P27216 316 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 BMP8BP34820 402 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 KRT9P35527 623 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 OR1G1P47890 313 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 CLCNKBP51801 687 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 EPHB4P54760 987 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 DEFB103AP81534 67 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 SOX4Q06945 474 aaPredicted RBP11.83□□□□□ -0.52
HDLBP-242ENST00000488013 RAPGEF1Q13905 1077 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 ARID5BQ14865 1188 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 UNC93AQ86WB7 457 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 METTL23Q86XA0 190 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 CCDC112Q8NEF3 446 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 RNPC3Q96LT9 517 aaKnown RBP11.83□□□□□ -0.52
HDLBP-242ENST00000488013 PANX2Q96RD6 677 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 MMS19Q96T76 1030 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 BCO2Q9BYV7 579 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 UBE2OQ9C0C9 1292 aaKnown RBP11.83□□□□□ -0.52
HDLBP-242ENST00000488013 SIX2Q9NPC8 291 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 NXF1Q9UBU9 619 aaKnown RBP11.83□□□□□ -0.52
HDLBP-242ENST00000488013 KIAA1257Q9ULG3 409 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 SNX9Q9Y5X1 595 aa11.83□□□□□ -0.52
HDLBP-242ENST00000488013 SF3B1O75533 1304 aaKnown RBP eCLIP11.83□□□□□ -0.522e-7■■■□□ 17.2
HDLBP-242ENST00000488013 SYN3O14994 580 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 TLL1O43897 1013 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 MFAP3LO75121 409 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 KIF4AO95239 1232 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 ODC1P11926 461 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 TYMPP19971 482 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 HNRNPH3P31942 346 aaKnown RBP11.82□□□□□ -0.52
HDLBP-242ENST00000488013 CASP14P31944 242 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 ASPAP45381 313 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 LHX1P48742 406 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 AFF1P51825 1210 aaKnown RBP11.82□□□□□ -0.52
HDLBP-242ENST00000488013 GUCY2FP51841 1108 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 CDK17Q00537 523 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 LRMPQ12912 555 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 BMS1Q14692 1282 aaKnown RBP11.82□□□□□ -0.52
HDLBP-242ENST00000488013 DRAP1Q14919 205 aaPredicted RBP11.82□□□□□ -0.52
HDLBP-242ENST00000488013 SPOUT1Q5T280 376 aaKnown RBP11.82□□□□□ -0.52
HDLBP-242ENST00000488013 SFMBT2Q5VUG0 894 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 IQCEQ6IPM2 695 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 DPY19L2P1Q6NXN4 242 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 PDXDC1Q6P996 788 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 DSTYKQ6XUX3 929 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 RRAGAQ7L523 313 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 VPS36Q86VN1 386 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 ZNF280BQ86YH2 543 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 GPR65Q8IYL9 337 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 FIBCD1Q8N539 461 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 SPC24Q8NBT2 197 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 SHC3Q92529 594 aa11.82□□□□□ -0.52
HDLBP-242ENST00000488013 ZNF558Q96NG5 402 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms