RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 MTCL1Q9Y4B5 1905 aaKnown RBP22.12■■□□□ 1.13
HDAC4-209ENST00000487617 DENND4AQ7Z401 1863 aa22.12■■□□□ 1.13
HDAC4-209ENST00000487617 ANO9A1A5B4 782 aa22.12■■□□□ 1.13
HDAC4-209ENST00000487617 PIRO00625 290 aa22.12■■□□□ 1.13
HDAC4-209ENST00000487617 PRRG1O14668 218 aa22.12■■□□□ 1.13
HDAC4-209ENST00000487617 EIF3DO15371 548 aaKnown RBP eCLIP22.12■■□□□ 1.13
HDAC4-209ENST00000487617 EXTL3O43909 919 aa22.12■■□□□ 1.13
HDAC4-209ENST00000487617 SLFN14P0C7P3 912 aa22.12■■□□□ 1.13
HDAC4-209ENST00000487617 PAX3P23760 479 aa22.12■■□□□ 1.13
HDAC4-209ENST00000487617 FSHRP23945 695 aa22.12■■□□□ 1.13
HDAC4-209ENST00000487617 CMA1P23946 247 aa22.12■■□□□ 1.13
HDAC4-209ENST00000487617 CUL4BQ13620 913 aa22.12■■□□□ 1.13
HDAC4-209ENST00000487617 TPGS2Q68CL5 300 aa22.12■■□□□ 1.13
HDAC4-209ENST00000487617 NT5DC4Q86YG4 428 aa22.12■■□□□ 1.13
HDAC4-209ENST00000487617 UBALD2Q8IYN6 164 aa22.12■■□□□ 1.13
HDAC4-209ENST00000487617 GRAMD1CQ8IYS0 662 aa22.12■■□□□ 1.13
HDAC4-209ENST00000487617 CYP4F11Q9HBI6 524 aa22.12■■□□□ 1.13
HDAC4-209ENST00000487617 RBAKQ9NYW8 714 aaPredicted RBP22.12■■□□□ 1.13
HDAC4-209ENST00000487617 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.12■■□□□ 1.131e-6■■■■□ 26.3
HDAC4-209ENST00000487617 A0A1B0GVL5 298 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 PVALEFA0A1B0GWK0 134 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 SPTLC1O15269 473 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 ACTN4O43707 911 aaKnown RBP22.11■■□□□ 1.13
HDAC4-209ENST00000487617 OAZ2O95190 189 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 POU2F2P09086 479 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 CPB1P15086 417 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 ATF2P15336 505 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 PFKFB1P16118 471 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 WNT7BP56706 349 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 NTHL1P78549 312 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 EPM2AIP1Q7L775 607 aaPredicted RBP22.11■■□□□ 1.13
HDAC4-209ENST00000487617 GPD1LQ8N335 351 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 ZNF507Q8TCN5 953 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 PBXIP1Q96AQ6 731 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 SENP8Q96LD8 212 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 SMOC2Q9H3U7 446 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 KCNK12Q9HB15 430 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 EPS15L1Q9UBC2 864 aa22.11■■□□□ 1.13
HDAC4-209ENST00000487617 KIAA0391O15091 583 aaKnown RBP22.1■■□□□ 1.13
HDAC4-209ENST00000487617 LRG1P02750 347 aa22.1■■□□□ 1.13
HDAC4-209ENST00000487617 ODC1P11926 461 aa22.1■■□□□ 1.13
HDAC4-209ENST00000487617 TYMPP19971 482 aa22.1■■□□□ 1.13
HDAC4-209ENST00000487617 HOXD13P35453 343 aa22.1■■□□□ 1.13
HDAC4-209ENST00000487617 TFAMQ00059 246 aaKnown RBP22.1■■□□□ 1.13
HDAC4-209ENST00000487617 EHHADHQ08426 723 aa22.1■■□□□ 1.13
HDAC4-209ENST00000487617 OVOS1Q6IE37 1185 aa22.1■■□□□ 1.13
HDAC4-209ENST00000487617 BMP8AQ7Z5Y6 402 aa22.1■■□□□ 1.13
HDAC4-209ENST00000487617 TCEAL8Q8IYN2 117 aa22.1■■□□□ 1.13
HDAC4-209ENST00000487617 PAGE5Q96GU1 130 aa22.1■■□□□ 1.13
HDAC4-209ENST00000487617 MFSD14AQ96MC6 490 aa22.1■■□□□ 1.13
HDAC4-209ENST00000487617 OXCT2Q9BYC2 517 aaPredicted RBP22.1■■□□□ 1.13
HDAC4-209ENST00000487617 SCAND2PQ9GZW5 306 aaPredicted RBP22.1■■□□□ 1.13
HDAC4-209ENST00000487617 HCFC1R1Q9NWW0 138 aa22.1■■□□□ 1.13
HDAC4-209ENST00000487617 IGSF9Q9P2J2 1179 aa22.1■■□□□ 1.13
HDAC4-209ENST00000487617 AFF4Q9UHB7 1163 aaKnown RBP22.1■■□□□ 1.13
HDAC4-209ENST00000487617 TECTAO75443 2155 aa22.09■■□□□ 1.13
HDAC4-209ENST00000487617 ARHGEF37A1IGU5 675 aa22.09■■□□□ 1.13
HDAC4-209ENST00000487617 SEC24AO95486 1093 aa22.09■■□□□ 1.13
HDAC4-209ENST00000487617 TAF6P49848 677 aa22.09■■□□□ 1.13
HDAC4-209ENST00000487617 ADCY1Q08828 1119 aa22.09■■□□□ 1.13
HDAC4-209ENST00000487617 NELFCDQ8IXH7 590 aa22.09■■□□□ 1.13
HDAC4-209ENST00000487617 CACTINQ8WUQ7 758 aaKnown RBP22.09■■□□□ 1.13
HDAC4-209ENST00000487617 ASIC4Q96FT7 647 aa22.09■■□□□ 1.13
HDAC4-209ENST00000487617 DNMT3BQ9UBC3 853 aaKnown RBP22.09■■□□□ 1.13
HDAC4-209ENST00000487617 USP25Q9UHP3 1055 aa22.09■■□□□ 1.13
HDAC4-209ENST00000487617 UBE4BO95155 1302 aa22.08■■□□□ 1.13
HDAC4-209ENST00000487617 OR6C75A6NL08 312 aa22.08■■□□□ 1.13
HDAC4-209ENST00000487617 OR4Q2P0C623 313 aa22.08■■□□□ 1.13
HDAC4-209ENST00000487617 LAMP2P13473 410 aa22.08■■□□□ 1.13
HDAC4-209ENST00000487617 TDGQ13569 410 aa22.08■■□□□ 1.13
HDAC4-209ENST00000487617 PABPC1LQ4VXU2 614 aaKnown RBP22.08■■□□□ 1.13
HDAC4-209ENST00000487617 RNF19BQ6ZMZ0 732 aa22.08■■□□□ 1.13
HDAC4-209ENST00000487617 SCFD1Q8WVM8 642 aa22.08■■□□□ 1.13
HDAC4-209ENST00000487617 PDE11AQ9HCR9 933 aa22.08■■□□□ 1.13
HDAC4-209ENST00000487617 SLC39A2Q9NP94 309 aa22.08■■□□□ 1.13
HDAC4-209ENST00000487617 HSPBP1Q9NZL4 362 aa22.08■■□□□ 1.13
HDAC4-209ENST00000487617 MAFFQ9ULX9 164 aa22.08■■□□□ 1.13
HDAC4-209ENST00000487617 HPSEQ9Y251 543 aa22.08■■□□□ 1.13
HDAC4-209ENST00000487617 INSL5Q9Y5Q6 135 aa22.08■■□□□ 1.13
HDAC4-209ENST00000487617 ZNF233A6NK53 670 aa22.07■■□□□ 1.12
HDAC4-209ENST00000487617 CYB561D2O14569 222 aa22.07■■□□□ 1.12
HDAC4-209ENST00000487617 SYKP43405 635 aa22.07■■□□□ 1.12
HDAC4-209ENST00000487617 ITFG1Q8TB96 612 aa22.07■■□□□ 1.12
HDAC4-209ENST00000487617 RSAD2Q8WXG1 361 aa22.07■■□□□ 1.12
HDAC4-209ENST00000487617 ZNF560Q96MR9 790 aa22.07■■□□□ 1.12
HDAC4-209ENST00000487617 AGPAT3Q9NRZ7 376 aa22.07■■□□□ 1.12
HDAC4-209ENST00000487617 DSEQ9UL01 958 aa22.07■■□□□ 1.12
HDAC4-209ENST00000487617 CDH7Q9ULB5 785 aa22.07■■□□□ 1.12
HDAC4-209ENST00000487617 TGFB1I1O43294 461 aa22.06■■□□□ 1.12
HDAC4-209ENST00000487617 ITGB3P05106 788 aa22.06■■□□□ 1.12
HDAC4-209ENST00000487617 CYP11A1P05108 521 aa22.06■■□□□ 1.12
HDAC4-209ENST00000487617 POLR2BP30876 1174 aaKnown RBP22.06■■□□□ 1.12
HDAC4-209ENST00000487617 NDUFA8P51970 172 aa22.06■■□□□ 1.12
HDAC4-209ENST00000487617 SV2CQ496J9 727 aa22.06■■□□□ 1.12
HDAC4-209ENST00000487617 HS2ST1Q7LGA3 356 aa22.06■■□□□ 1.12
HDAC4-209ENST00000487617 METTL23Q86XA0 190 aa22.06■■□□□ 1.12
HDAC4-209ENST00000487617 CBWD2Q8IUF1 395 aa22.06■■□□□ 1.12
HDAC4-209ENST00000487617 SUGP1Q8IWZ8 645 aaKnown RBP22.06■■□□□ 1.12
HDAC4-209ENST00000487617 C1orf127Q8N9H9 656 aa22.06■■□□□ 1.12
HDAC4-209ENST00000487617 FAM84AQ96KN4 292 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms