RNA–Protein interactions for RNA: ENST00000487335.5

FAM107B-221, Transcript of family with sequence similarity 107 member B, humanhuman

TSL 1 (best)

Gene FAM107B, Length 2,317 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM107B-221ENST00000487335 CA3P07451 260 aa11.46□□□□□ -0.57
FAM107B-221ENST00000487335 AP3M2P53677 418 aa11.46□□□□□ -0.57
FAM107B-221ENST00000487335 SMAD3P84022 425 aaKnown RBP11.46□□□□□ -0.57
FAM107B-221ENST00000487335 RAB30Q15771 203 aa11.46□□□□□ -0.57
FAM107B-221ENST00000487335 ZNF280DQ6N043 979 aa11.46□□□□□ -0.57
FAM107B-221ENST00000487335 ACRBPQ8NEB7 543 aa11.46□□□□□ -0.57
FAM107B-221ENST00000487335 UROC1Q96N76 676 aa11.46□□□□□ -0.57
FAM107B-221ENST00000487335 FAM193BQ96PV7 902 aaPredicted RBP11.46□□□□□ -0.57
FAM107B-221ENST00000487335 DPP3Q9NY33 737 aa11.46□□□□□ -0.57
FAM107B-221ENST00000487335 MAGEC2Q9UBF1 373 aaPredicted RBP11.46□□□□□ -0.57
FAM107B-221ENST00000487335 CACNG4Q9UBN1 327 aa11.46□□□□□ -0.57
FAM107B-221ENST00000487335 ANO9A1A5B4 782 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 ZC3H11AO75152 810 aaKnown RBP eCLIP11.46□□□□□ -0.58
FAM107B-221ENST00000487335 TNNC2P02585 160 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 GALTP07902 379 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 LAG3P18627 525 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 GTF2H1P32780 548 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 GCLMP48507 274 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 SLC11A1P49279 550 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 CLCNKBP51801 687 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 UPP1Q16831 310 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 ZACNQ401N2 412 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 TCERG1LQ5VWI1 586 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 TDRD10Q5VZ19 366 aaKnown RBP11.46□□□□□ -0.58
FAM107B-221ENST00000487335 SCARA3Q6AZY7 606 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 TRAPPC11Q7Z392 1133 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 TMEM8AQ9HCN3 771 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 SIX4Q9UIU6 781 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 ITGA11Q9UKX5 1188 aa11.46□□□□□ -0.58
FAM107B-221ENST00000487335 COL4A4P53420 1690 aaPredicted RBP11.45□□□□□ -0.58
FAM107B-221ENST00000487335 CDH23Q9H251 3354 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 ERICH4A6NGS2 130 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 PIRO00625 290 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 PPEF2O14830 753 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 STX10O60499 249 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 ATP1A3P13637 1013 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 RPL9P32969 192 aaKnown RBP11.45□□□□□ -0.58
FAM107B-221ENST00000487335 MTIF2P46199 727 aaKnown RBP11.45□□□□□ -0.58
FAM107B-221ENST00000487335 BCAR1P56945 870 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 MAN2A1Q16706 1144 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 CBWD6Q4V339 395 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 CBWD3Q5JTY5 395 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 CBWD5Q5RIA9 395 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 C9orf57Q5W0N0 161 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 SV2AQ7L0J3 742 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 APTXQ7Z2E3 356 aaKnown RBP11.45□□□□□ -0.58
FAM107B-221ENST00000487335 COLGALT1Q8NBJ5 622 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 TUBGCP2Q9BSJ2 902 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 LIMA1Q9UHB6 759 aaKnown RBP11.45□□□□□ -0.58
FAM107B-221ENST00000487335 MSRAQ9UJ68 235 aa11.45□□□□□ -0.58
FAM107B-221ENST00000487335 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.45□□□□□ -0.58
FAM107B-221ENST00000487335 TMEM189-UBE2V1I3L0A0 370 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 PODXLO00592 558 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 NRP1O14786 923 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 ITGB3P05106 788 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 PBX3P40426 434 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 OR1G1P47890 313 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 MXI1P50539 228 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 KCNH2Q12809 1159 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 FOXD4Q12950 439 aaPredicted RBP11.44□□□□□ -0.58
FAM107B-221ENST00000487335 KRT31Q15323 416 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 MIIPQ5JXC2 388 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 KRT39Q6A163 491 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 KCNT2Q6UVM3 1135 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 CD300LGQ6UXG3 332 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 SPRED2Q7Z698 418 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 RNF214Q8ND24 703 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 C3orf58Q8NDZ4 430 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 DDX27Q96GQ7 796 aaKnown RBP11.44□□□□□ -0.58
FAM107B-221ENST00000487335 NKX2-4Q9H2Z4 354 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 MARCH5Q9NX47 278 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 CARNS1A5YM72 827 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 LRRC10BA6NIK2 292 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 GOLGA6L6A8MZA4 724 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 F8W810 466 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 GOLGA6L19H0YKK7 550 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 PMM2O15305 246 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 VNN1O95497 513 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 AFPP02771 609 aaKnown RBP11.44□□□□□ -0.58
FAM107B-221ENST00000487335 IGFBP6P24592 240 aaPredicted RBP11.44□□□□□ -0.58
FAM107B-221ENST00000487335 DNAJB2P25686 324 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 POLR2BP30876 1174 aaKnown RBP11.44□□□□□ -0.58
FAM107B-221ENST00000487335 FMO5P49326 533 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 TAP1Q03518 808 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 SPOUT1Q5T280 376 aaKnown RBP11.44□□□□□ -0.58
FAM107B-221ENST00000487335 TMEM173Q86WV6 379 aaPredicted RBP11.44□□□□□ -0.58
FAM107B-221ENST00000487335 RABGGTAQ92696 567 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 ZNF558Q96NG5 402 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 MMRN2Q9H8L6 949 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 RWDD3Q9Y3V2 267 aa11.44□□□□□ -0.58
FAM107B-221ENST00000487335 KIF4AO95239 1232 aa11.43□□□□□ -0.58
FAM107B-221ENST00000487335 CST3P01034 146 aaPredicted RBP11.43□□□□□ -0.58
FAM107B-221ENST00000487335 ALDH2P05091 517 aa11.43□□□□□ -0.58
FAM107B-221ENST00000487335 ITGB1P05556 798 aa11.43□□□□□ -0.58
FAM107B-221ENST00000487335 ALDH7A1P49419 539 aaKnown RBP11.43□□□□□ -0.58
FAM107B-221ENST00000487335 BIRC3Q13489 604 aa11.43□□□□□ -0.58
FAM107B-221ENST00000487335 DCLRE1AQ6PJP8 1040 aa11.43□□□□□ -0.58
FAM107B-221ENST00000487335 SLC39A11Q8N1S5 342 aa11.43□□□□□ -0.58
FAM107B-221ENST00000487335 BCL7CQ8WUZ0 217 aaPredicted RBP11.43□□□□□ -0.58
FAM107B-221ENST00000487335 C17orf80Q9BSJ5 609 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms