RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 HS2ST1Q7LGA3 356 aa24.22■■□□□ 1.47
CDHR3-212ENST00000487084 NT5DC4Q86YG4 428 aa24.22■■□□□ 1.47
CDHR3-212ENST00000487084 PDE11AQ9HCR9 933 aa24.22■■□□□ 1.47
CDHR3-212ENST00000487084 POLIQ9UNA4 740 aa24.22■■□□□ 1.47
CDHR3-212ENST00000487084 CLUHO75153 1309 aa24.21■■□□□ 1.47
CDHR3-212ENST00000487084 ANO9A1A5B4 782 aa24.21■■□□□ 1.47
CDHR3-212ENST00000487084 WDR27A2RRH5 827 aa24.21■■□□□ 1.47
CDHR3-212ENST00000487084 ZNF233A6NK53 670 aa24.21■■□□□ 1.47
CDHR3-212ENST00000487084 SPTLC1O15269 473 aa24.21■■□□□ 1.47
CDHR3-212ENST00000487084 CCL16O15467 120 aa24.21■■□□□ 1.47
CDHR3-212ENST00000487084 TGFB1I1O43294 461 aa24.21■■□□□ 1.47
CDHR3-212ENST00000487084 MYL1P05976 194 aa24.21■■□□□ 1.47
CDHR3-212ENST00000487084 PRR29P0C7W0 189 aa24.21■■□□□ 1.47
CDHR3-212ENST00000487084 ELF1P32519 619 aa24.21■■□□□ 1.47
CDHR3-212ENST00000487084 KRBA2Q6ZNG9 492 aa24.21■■□□□ 1.47
CDHR3-212ENST00000487084 CBWD2Q8IUF1 395 aa24.21■■□□□ 1.47
CDHR3-212ENST00000487084 CACTINQ8WUQ7 758 aaKnown RBP24.21■■□□□ 1.47
CDHR3-212ENST00000487084 ACSF2Q96CM8 615 aaPredicted RBP24.21■■□□□ 1.47
CDHR3-212ENST00000487084 SENP8Q96LD8 212 aa24.21■■□□□ 1.47
CDHR3-212ENST00000487084 WDR6Q9NNW5 1121 aaKnown RBP24.21■■□□□ 1.47
CDHR3-212ENST00000487084 ANK1P16157 1881 aa24.2■■□□□ 1.46
CDHR3-212ENST00000487084 TBC1D4O60343 1298 aa24.2■■□□□ 1.46
CDHR3-212ENST00000487084 ZNF202O95125 648 aa24.2■■□□□ 1.46
CDHR3-212ENST00000487084 RPN1P04843 607 aaKnown RBP24.2■■□□□ 1.46
CDHR3-212ENST00000487084 HNRNPA1P09651 372 aaKnown RBP eCLIP24.2■■□□□ 1.46
CDHR3-212ENST00000487084 ODC1P11926 461 aa24.2■■□□□ 1.46
CDHR3-212ENST00000487084 CPB1P15086 417 aa24.2■■□□□ 1.46
CDHR3-212ENST00000487084 TAF6P49848 677 aa24.2■■□□□ 1.46
CDHR3-212ENST00000487084 STK4Q13043 487 aa24.2■■□□□ 1.46
CDHR3-212ENST00000487084 BMT2Q1RMZ1 405 aa24.2■■□□□ 1.46
CDHR3-212ENST00000487084 LMBRD2Q68DH5 695 aaPredicted RBP24.2■■□□□ 1.46
CDHR3-212ENST00000487084 OTOP3Q7RTS5 596 aa24.2■■□□□ 1.46
CDHR3-212ENST00000487084 RDH13Q8NBN7 331 aa24.2■■□□□ 1.46
CDHR3-212ENST00000487084 ZNF461Q8TAF7 563 aa24.2■■□□□ 1.46
CDHR3-212ENST00000487084 CCDC47Q96A33 483 aaKnown RBP24.2■■□□□ 1.46
CDHR3-212ENST00000487084 FAM84AQ96KN4 292 aa24.2■■□□□ 1.46
CDHR3-212ENST00000487084 RHOBTB2Q9BYZ6 727 aa24.2■■□□□ 1.46
CDHR3-212ENST00000487084 USTQ9Y2C2 406 aa24.2■■□□□ 1.46
CDHR3-212ENST00000487084 C2orf16Q68DN1 1984 aa24.2■■□□□ 1.46
CDHR3-212ENST00000487084 PRRG1O14668 218 aa24.19■■□□□ 1.46
CDHR3-212ENST00000487084 XYLBO75191 536 aa24.19■■□□□ 1.46
CDHR3-212ENST00000487084 TMEM191BP0C7N4 346 aa24.19■■□□□ 1.46
CDHR3-212ENST00000487084 POLR2BP30876 1174 aaKnown RBP24.19■■□□□ 1.46
CDHR3-212ENST00000487084 GBP2P32456 591 aaPredicted RBP24.19■■□□□ 1.46
CDHR3-212ENST00000487084 KNOP1Q1ED39 458 aaKnown RBP24.19■■□□□ 1.46
CDHR3-212ENST00000487084 TMEM31Q5JXX7 168 aa24.19■■□□□ 1.46
CDHR3-212ENST00000487084 OVOS1Q6IE37 1185 aa24.19■■□□□ 1.46
CDHR3-212ENST00000487084 KIAA0895Q8NCT3 520 aa24.19■■□□□ 1.46
CDHR3-212ENST00000487084 ZNF560Q96MR9 790 aa24.19■■□□□ 1.46
CDHR3-212ENST00000487084 MTMR12Q9C0I1 747 aa24.19■■□□□ 1.46
CDHR3-212ENST00000487084 KIAA1586Q9HCI6 787 aa24.19■■□□□ 1.46
CDHR3-212ENST00000487084 MTCL1Q9Y4B5 1905 aaKnown RBP24.18■■□□□ 1.46
CDHR3-212ENST00000487084 ARHGEF37A1IGU5 675 aa24.18■■□□□ 1.46
CDHR3-212ENST00000487084 ITGB3P05106 788 aa24.18■■□□□ 1.46
CDHR3-212ENST00000487084 KRT19P08727 400 aa24.18■■□□□ 1.46
CDHR3-212ENST00000487084 TYMPP19971 482 aa24.18■■□□□ 1.46
CDHR3-212ENST00000487084 PAX3P23760 479 aa24.18■■□□□ 1.46
CDHR3-212ENST00000487084 HOXA9P31269 272 aa24.18■■□□□ 1.46
CDHR3-212ENST00000487084 PSMD2Q13200 908 aa24.18■■□□□ 1.46
CDHR3-212ENST00000487084 UVSSAQ2YD98 709 aa24.18■■□□□ 1.46
CDHR3-212ENST00000487084 GET4Q7L5D6 327 aaPredicted RBP24.18■■□□□ 1.46
CDHR3-212ENST00000487084 GRASPQ7Z6J2 395 aaPredicted RBP24.18■■□□□ 1.46
CDHR3-212ENST00000487084 PLCD3Q8N3E9 789 aa24.18■■□□□ 1.46
CDHR3-212ENST00000487084 C1orf127Q8N9H9 656 aa24.18■■□□□ 1.46
CDHR3-212ENST00000487084 CCDC34Q96HJ3 373 aa24.18■■□□□ 1.46
CDHR3-212ENST00000487084 CYP4F11Q9HBI6 524 aa24.18■■□□□ 1.46
CDHR3-212ENST00000487084 LIMD1Q9UGP4 676 aa24.18■■□□□ 1.46
CDHR3-212ENST00000487084 AGAP1Q9UPQ3 857 aa24.18■■□□□ 1.46
CDHR3-212ENST00000487084 CYB561D2O14569 222 aa24.17■■□□□ 1.46
CDHR3-212ENST00000487084 ABLIM3O94929 683 aa24.17■■□□□ 1.46
CDHR3-212ENST00000487084 OAZ2O95190 189 aa24.17■■□□□ 1.46
CDHR3-212ENST00000487084 OR4Q2P0C623 313 aa24.17■■□□□ 1.46
CDHR3-212ENST00000487084 SNRPFP62306 86 aaKnown RBP24.17■■□□□ 1.46
CDHR3-212ENST00000487084 ADCY1Q08828 1119 aa24.17■■□□□ 1.46
CDHR3-212ENST00000487084 SNRNP35Q16560 246 aaKnown RBP24.17■■□□□ 1.46
CDHR3-212ENST00000487084 SV2CQ496J9 727 aa24.17■■□□□ 1.46
CDHR3-212ENST00000487084 ZDHHC14Q8IZN3 488 aa24.17■■□□□ 1.46
CDHR3-212ENST00000487084 CSGALNACT2Q8N6G5 542 aa24.17■■□□□ 1.46
CDHR3-212ENST00000487084 XXYLT1Q8NBI6 393 aa24.17■■□□□ 1.46
CDHR3-212ENST00000487084 ANKRD36BP1Q96IX9 119 aa24.17■■□□□ 1.46
CDHR3-212ENST00000487084 DENND4AQ7Z401 1863 aa24.16■■□□□ 1.46
CDHR3-212ENST00000487084 PAPLNO95428 1278 aa24.16■■□□□ 1.46
CDHR3-212ENST00000487084 TNNC2P02585 160 aa24.16■■□□□ 1.46
CDHR3-212ENST00000487084 LRG1P02750 347 aa24.16■■□□□ 1.46
CDHR3-212ENST00000487084 ASGR2P07307 311 aa24.16■■□□□ 1.46
CDHR3-212ENST00000487084 ATF2P15336 505 aa24.16■■□□□ 1.46
CDHR3-212ENST00000487084 PNPLA4P41247 253 aa24.16■■□□□ 1.46
CDHR3-212ENST00000487084 NTHL1P78549 312 aa24.16■■□□□ 1.46
CDHR3-212ENST00000487084 DPYDQ12882 1025 aa24.16■■□□□ 1.46
CDHR3-212ENST00000487084 SURF1Q15526 300 aa24.16■■□□□ 1.46
CDHR3-212ENST00000487084 PTPN21Q16825 1174 aa24.16■■□□□ 1.46
CDHR3-212ENST00000487084 TPGS2Q68CL5 300 aa24.16■■□□□ 1.46
CDHR3-212ENST00000487084 METTL23Q86XA0 190 aa24.16■■□□□ 1.46
CDHR3-212ENST00000487084 OXCT2Q9BYC2 517 aaPredicted RBP24.16■■□□□ 1.46
CDHR3-212ENST00000487084 C11orf16Q9NQ32 467 aa24.16■■□□□ 1.46
CDHR3-212ENST00000487084 CGNQ9P2M7 1197 aaKnown RBP24.16■■□□□ 1.46
CDHR3-212ENST00000487084 AFF4Q9UHB7 1163 aaKnown RBP24.16■■□□□ 1.46
CDHR3-212ENST00000487084 ITGA11Q9UKX5 1188 aa24.16■■□□□ 1.46
CDHR3-212ENST00000487084 R3HCC1Q9Y3T6 440 aaKnown RBP24.16■■□□□ 1.46
CDHR3-212ENST00000487084 OR6C75A6NL08 312 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms