RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 HERC2P3Q9BVR0 1158 aa14.18□□□□□ -0.14
NR1H3-223ENST00000486991 COLEC11Q9BWP8 271 aa14.18□□□□□ -0.14
NR1H3-223ENST00000486991 EMILIN2Q9BXX0 1053 aa14.18□□□□□ -0.14
NR1H3-223ENST00000486991 SFXN1Q9H9B4 322 aa14.18□□□□□ -0.14
NR1H3-223ENST00000486991 CGNQ9P2M7 1197 aaKnown RBP14.18□□□□□ -0.14
NR1H3-223ENST00000486991 PARP2Q9UGN5 583 aa14.18□□□□□ -0.14
NR1H3-223ENST00000486991 TRAF3IP3Q9Y228 551 aa14.18□□□□□ -0.14
NR1H3-223ENST00000486991 CLDN3O15551 220 aa14.17□□□□□ -0.14
NR1H3-223ENST00000486991 CAVIN2O95810 425 aa14.17□□□□□ -0.14
NR1H3-223ENST00000486991 NR3C1P04150 777 aa14.17□□□□□ -0.14
NR1H3-223ENST00000486991 IGFBP6P24592 240 aaPredicted RBP14.17□□□□□ -0.14
NR1H3-223ENST00000486991 OR1G1P47890 313 aa14.17□□□□□ -0.14
NR1H3-223ENST00000486991 SNRPFP62306 86 aaKnown RBP14.17□□□□□ -0.14
NR1H3-223ENST00000486991 SLFN12LQ6IEE8 588 aa14.17□□□□□ -0.14
NR1H3-223ENST00000486991 ELMSAN1Q6PJG2 1045 aa14.17□□□□□ -0.14
NR1H3-223ENST00000486991 CSGALNACT2Q8N6G5 542 aa14.17□□□□□ -0.14
NR1H3-223ENST00000486991 SNX27Q96L92 541 aa14.17□□□□□ -0.14
NR1H3-223ENST00000486991 MED15Q96RN5 788 aa14.17□□□□□ -0.14
NR1H3-223ENST00000486991 DUSP9Q99956 384 aaKnown RBP14.17□□□□□ -0.14
NR1H3-223ENST00000486991 CBWD1Q9BRT8 395 aa14.17□□□□□ -0.14
NR1H3-223ENST00000486991 MSTO1Q9BUK6 570 aa14.17□□□□□ -0.14
NR1H3-223ENST00000486991 HAPLN2Q9GZV7 340 aa14.17□□□□□ -0.14
NR1H3-223ENST00000486991 CBX8Q9HC52 389 aa14.17□□□□□ -0.14
NR1H3-223ENST00000486991 MAN1C1Q9NR34 630 aa14.17□□□□□ -0.14
NR1H3-223ENST00000486991 MRPL17Q9NRX2 175 aaKnown RBP14.17□□□□□ -0.14
NR1H3-223ENST00000486991 USTQ9Y2C2 406 aa14.17□□□□□ -0.14
NR1H3-223ENST00000486991 FRYLO94915 3013 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 CCDC195A0A1B0GUA6 201 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 GOLGA8IPA6NC78 632 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 GOLGA8JA6NMD2 632 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 BECN2A8MW95 431 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 TEX28O15482 410 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 RFPL2O75678 378 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 SOD2P04179 222 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 GARTP22102 1010 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 NR2F2P24468 414 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 RPL13P26373 211 aaKnown RBP14.16□□□□□ -0.14
NR1H3-223ENST00000486991 ADSSP30520 456 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 GRM5P41594 1212 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 MYL5Q02045 173 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 MCL1Q07820 350 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 ADAM9Q13443 819 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 TUSC3Q13454 348 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 NOLC1Q14978 699 aaKnown RBP eCLIP14.16□□□□□ -0.14
NR1H3-223ENST00000486991 EDRF1Q3B7T1 1238 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 XKR4Q5GH76 650 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 KIAA0319Q5VV43 1072 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 ALKAL1Q6UXT8 129 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 CCDC149Q6ZUS6 474 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 GLYCTKQ8IVS8 523 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 ENOX1Q8TC92 643 aaKnown RBP14.16□□□□□ -0.14
NR1H3-223ENST00000486991 FAM200AQ8TCP9 573 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 ACSF2Q96CM8 615 aaPredicted RBP14.16□□□□□ -0.14
NR1H3-223ENST00000486991 SAAL1Q96ER3 474 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 EEF2KMTQ96G04 330 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 PPP1R10Q96QC0 940 aaKnown RBP14.16□□□□□ -0.14
NR1H3-223ENST00000486991 BPIFA3Q9BQP9 254 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 GPR62Q9BZJ7 368 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 KCNK12Q9HB15 430 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 HSPBP1Q9NZL4 362 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 DPP7Q9UHL4 492 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 AGO2Q9UKV8 859 aaKnown RBP14.16□□□□□ -0.14
NR1H3-223ENST00000486991 STYXL1Q9Y6J8 313 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 SPTBN4Q9H254 2564 aa14.16□□□□□ -0.14
NR1H3-223ENST00000486991 A0A0B4J269 797 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 PRR23AA6NEV1 266 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 SMTNL1A8MU46 457 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 PROB1E7EW31 1015 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 TULP1O00294 542 aaPredicted RBP14.15□□□□□ -0.14
NR1H3-223ENST00000486991 CETN3O15182 167 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 FAM189A1O60320 539 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 EXOC3O60645 756 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 URODP06132 367 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 MCF2P10911 925 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 FKBP3Q00688 224 aaKnown RBP14.15□□□□□ -0.14
NR1H3-223ENST00000486991 SOX4Q06945 474 aaPredicted RBP14.15□□□□□ -0.14
NR1H3-223ENST00000486991 TDGQ13569 410 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 SPATA1Q5VX52 437 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 CEP135Q66GS9 1140 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 CD300LGQ6UXG3 332 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 OTOP3Q7RTS5 596 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 PALB2Q86YC2 1186 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 C12orf56Q8IXR9 622 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 SIX5Q8N196 739 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 XXYLT1Q8NBI6 393 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 RNF214Q8ND24 703 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 MYADMQ96S97 322 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 SRRTQ9BXP5 876 aaKnown RBP14.15□□□□□ -0.14
NR1H3-223ENST00000486991 IRF2BPLQ9H1B7 796 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 CHST7Q9NS84 486 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 NFE2L3Q9Y4A8 694 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 SCN1AP35498 2009 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 NOTCH4Q99466 2003 aa14.15□□□□□ -0.14
NR1H3-223ENST00000486991 TSC2P49815 1807 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 CASTOR2A6NHX0 329 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 GOLGA6L19H0YKK7 550 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 OGTO15294 1046 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 KIF4AO95239 1232 aa14.14□□□□□ -0.15
NR1H3-223ENST00000486991 FGFR1OPO95684 399 aaKnown RBP14.14□□□□□ -0.15
NR1H3-223ENST00000486991 CFHP08603 1231 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms