RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 APBB3O95704 486 aa9.29□□□□□ -0.92
APTX-228ENST00000486724 LRG1P02750 347 aa9.29□□□□□ -0.92
APTX-228ENST00000486724 OATP04181 439 aa9.29□□□□□ -0.92
APTX-228ENST00000486724 PSAPP07602 524 aa9.29□□□□□ -0.92
APTX-228ENST00000486724 ZSCAN22P10073 491 aaPredicted RBP9.29□□□□□ -0.92
APTX-228ENST00000486724 DHPSP49366 369 aaPredicted RBP9.29□□□□□ -0.92
APTX-228ENST00000486724 C1QBPQ07021 282 aaKnown RBP9.29□□□□□ -0.92
APTX-228ENST00000486724 DRP2Q13474 957 aa9.29□□□□□ -0.92
APTX-228ENST00000486724 TRIP6Q15654 476 aaKnown RBP9.29□□□□□ -0.92
APTX-228ENST00000486724 MAPK6Q16659 721 aa9.29□□□□□ -0.92
APTX-228ENST00000486724 ZSCAN23Q3MJ62 389 aa9.29□□□□□ -0.92
APTX-228ENST00000486724 FAM171A1Q5VUB5 890 aa9.29□□□□□ -0.92
APTX-228ENST00000486724 KRT25Q7Z3Z0 450 aa9.29□□□□□ -0.92
APTX-228ENST00000486724 CEP57Q86XR8 500 aa9.29□□□□□ -0.92
APTX-228ENST00000486724 PNPLA1Q8N8W4 532 aa9.29□□□□□ -0.92
APTX-228ENST00000486724 FAM181AQ8N9Y4 354 aa9.29□□□□□ -0.92
APTX-228ENST00000486724 ZSCAN18Q8TBC5 510 aaPredicted RBP9.29□□□□□ -0.92
APTX-228ENST00000486724 ANKRD7Q92527 254 aa9.29□□□□□ -0.92
APTX-228ENST00000486724 SYAP1Q96A49 352 aaPredicted RBP9.29□□□□□ -0.92
APTX-228ENST00000486724 ZSWIM3Q96MP5 696 aa9.29□□□□□ -0.92
APTX-228ENST00000486724 FCRL3Q96P31 734 aaPredicted RBP9.29□□□□□ -0.92
APTX-228ENST00000486724 EBF1Q9UH73 591 aa9.29□□□□□ -0.92
APTX-228ENST00000486724 APOBEC2Q9Y235 224 aaKnown RBP9.29□□□□□ -0.92
APTX-228ENST00000486724 TSC2P49815 1807 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 THADAQ6YHU6 1953 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 TEX51A0A1B0GUA7 166 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 VPS37CA5D8V6 355 aaPredicted RBP9.28□□□□□ -0.92
APTX-228ENST00000486724 H3BQV1 296 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 MEIS1O00470 390 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 OPHN1O60890 802 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 F13A1P00488 732 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 PTMAP06454 111 aaKnown RBP9.28□□□□□ -0.92
APTX-228ENST00000486724 BRD2P25440 801 aaKnown RBP9.28□□□□□ -0.92
APTX-228ENST00000486724 OR1D2P34982 312 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 CCR2P41597 374 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 DNM2P50570 870 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 AKAP17AQ02040 695 aaKnown RBP9.28□□□□□ -0.92
APTX-228ENST00000486724 CYP4F3Q08477 520 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 SPIRE1Q08AE8 756 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 USP39Q53GS9 565 aaKnown RBP9.28□□□□□ -0.92
APTX-228ENST00000486724 UBXN11Q5T124 520 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 CYP4A22Q5TCH4 519 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 ZNF746Q6NUN9 644 aaPredicted RBP9.28□□□□□ -0.92
APTX-228ENST00000486724 HAUS6Q7Z4H7 955 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 CMTR1Q8N1G2 835 aaKnown RBP9.28□□□□□ -0.92
APTX-228ENST00000486724 SMG8Q8ND04 991 aaKnown RBP9.28□□□□□ -0.92
APTX-228ENST00000486724 TTC8Q8TAM2 541 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 C8orf76Q96K31 380 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 ZFP42Q96MM3 310 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 ZNF830Q96NB3 372 aaPredicted RBP9.28□□□□□ -0.92
APTX-228ENST00000486724 TMEM209Q96SK2 561 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 NRBP2Q9NSY0 501 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 SPTLC3Q9NUV7 552 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 GABBR1Q9UBS5 961 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 MBD1Q9UIS9 605 aaPredicted RBP9.28□□□□□ -0.92
APTX-228ENST00000486724 PCDHB9Q9Y5E1 797 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 PCDHA10Q9Y5I2 948 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 PTPRBP23467 1997 aa9.28□□□□□ -0.92
APTX-228ENST00000486724 SPTAN1Q13813 2472 aaKnown RBP9.27□□□□□ -0.93
APTX-228ENST00000486724 ARHGEF37A1IGU5 675 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 IPO5O00410 1097 aaKnown RBP9.27□□□□□ -0.93
APTX-228ENST00000486724 DHX15O43143 795 aaKnown RBP9.27□□□□□ -0.93
APTX-228ENST00000486724 RNF40O75150 1001 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 KRT38O76015 456 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 DPP6P42658 865 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 DGKEP52429 567 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 PRKCEQ02156 737 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 GRSF1Q12849 480 aaKnown RBP eCLIP9.27□□□□□ -0.93
APTX-228ENST00000486724 PFKFB3Q16875 520 aaPredicted RBP9.27□□□□□ -0.93
APTX-228ENST00000486724 ARHGAP29Q52LW3 1261 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 SLC23A3Q6PIS1 610 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 TOGARAM2Q6ZUX3 1019 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 NIPA1Q7RTP0 329 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 RHPN2Q8IUC4 686 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 SYT12Q8IV01 421 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 FAM177A1Q8N128 213 aaPredicted RBP9.27□□□□□ -0.93
APTX-228ENST00000486724 CCDC82Q8N4S0 544 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 FBXO18Q8NFZ0 1043 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 RABGGTAQ92696 567 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 NLRP4Q96MN2 994 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 AIFM3Q96NN9 605 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 GTPBP2Q9BX10 602 aaKnown RBP9.27□□□□□ -0.93
APTX-228ENST00000486724 RBSNQ9H1K0 784 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 SLITRK6Q9H5Y7 841 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 POLMQ9NP87 494 aaPredicted RBP9.27□□□□□ -0.93
APTX-228ENST00000486724 MIOSQ9NXC5 875 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 GTSE1Q9NYZ3 720 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 SEPT9Q9UHD8 586 aaPredicted RBP9.27□□□□□ -0.93
APTX-228ENST00000486724 INVSQ9Y283 1065 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 IPPQ9Y573 584 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 COL6A6A6NMZ7 2263 aa9.27□□□□□ -0.93
APTX-228ENST00000486724 MUC22E2RYF6 1773 aaPredicted RBP9.27□□□□□ -0.93
APTX-228ENST00000486724 ABCA7Q8IZY2 2146 aa9.26□□□□□ -0.93
APTX-228ENST00000486724 TNRC6BQ9UPQ9 1833 aaKnown RBP9.26□□□□□ -0.93
APTX-228ENST00000486724 ZMYM2Q9UBW7 1377 aa9.26□□□□□ -0.93
APTX-228ENST00000486724 hCG_1984214I3L0E3 225 aa9.26□□□□□ -0.93
APTX-228ENST00000486724 PRRG1O14668 218 aa9.26□□□□□ -0.93
APTX-228ENST00000486724 TNFRSF10BO14763 440 aa9.26□□□□□ -0.93
APTX-228ENST00000486724 CFIP05156 583 aa9.26□□□□□ -0.93
APTX-228ENST00000486724 CD59P13987 128 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms