RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 LRG1P02750 347 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 TYMPP19971 482 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 GARTP22102 1010 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 PABPC1LQ4VXU2 614 aaKnown RBP19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 IER5LQ5T953 404 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 USP37Q86T82 979 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 PRRX2Q99811 253 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 HCFC1R1Q9NWW0 138 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 RCOR1Q9UKL0 485 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 KCNH3Q9ULD8 1083 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 MYO10Q9HD67 2058 aa19.95■□□□□ 0.78
PRPF40A-209ENST00000486100 PRPF6O94906 941 aaKnown RBP19.94■□□□□ 0.78
PRPF40A-209ENST00000486100 IL18RAPO95256 599 aa19.94■□□□□ 0.78
PRPF40A-209ENST00000486100 PTPN2P17706 415 aa19.94■□□□□ 0.78
PRPF40A-209ENST00000486100 ME1P48163 572 aa19.94■□□□□ 0.78
PRPF40A-209ENST00000486100 VCPP55072 806 aaKnown RBP19.94■□□□□ 0.78
PRPF40A-209ENST00000486100 DNM1Q05193 864 aaKnown RBP19.94■□□□□ 0.78
PRPF40A-209ENST00000486100 CNNM4Q6P4Q7 775 aa19.94■□□□□ 0.78
PRPF40A-209ENST00000486100 NT5DC4Q86YG4 428 aa19.94■□□□□ 0.78
PRPF40A-209ENST00000486100 ITFG1Q8TB96 612 aa19.94■□□□□ 0.78
PRPF40A-209ENST00000486100 FGF13Q92913 245 aa19.94■□□□□ 0.78
PRPF40A-209ENST00000486100 SENP8Q96LD8 212 aa19.94■□□□□ 0.78
PRPF40A-209ENST00000486100 FAM213AQ9BRX8 229 aa19.94■□□□□ 0.78
PRPF40A-209ENST00000486100 DPP3Q9NY33 737 aa19.94■□□□□ 0.78
PRPF40A-209ENST00000486100 FAM13BQ9NYF5 915 aa19.94■□□□□ 0.78
PRPF40A-209ENST00000486100 OR6C75A6NL08 312 aa19.93■□□□□ 0.78
PRPF40A-209ENST00000486100 SPTLC1O15269 473 aa19.93■□□□□ 0.78
PRPF40A-209ENST00000486100 POLR2DO15514 142 aaKnown RBP19.93■□□□□ 0.78
PRPF40A-209ENST00000486100 NARSO43776 548 aaKnown RBP19.93■□□□□ 0.78
PRPF40A-209ENST00000486100 CPB1P15086 417 aa19.93■□□□□ 0.78
PRPF40A-209ENST00000486100 ADCY1Q08828 1119 aa19.93■□□□□ 0.78
PRPF40A-209ENST00000486100 HTR4Q13639 388 aa19.93■□□□□ 0.78
PRPF40A-209ENST00000486100 RNF19BQ6ZMZ0 732 aa19.93■□□□□ 0.78
PRPF40A-209ENST00000486100 STXBP4Q6ZWJ1 553 aa19.93■□□□□ 0.78
PRPF40A-209ENST00000486100 C7orf25Q9BPX7 421 aa19.93■□□□□ 0.78
PRPF40A-209ENST00000486100 MAGEF1Q9HAY2 307 aa19.93■□□□□ 0.78
PRPF40A-209ENST00000486100 AVENQ9NQS1 362 aaPredicted RBP19.93■□□□□ 0.78
PRPF40A-209ENST00000486100 WNT16Q9UBV4 365 aa19.93■□□□□ 0.78
PRPF40A-209ENST00000486100 INSL5Q9Y5Q6 135 aa19.93■□□□□ 0.78
PRPF40A-209ENST00000486100 RHOP08100 348 aa19.92■□□□□ 0.78
PRPF40A-209ENST00000486100 ODC1P11926 461 aa19.92■□□□□ 0.78
PRPF40A-209ENST00000486100 ASIC1P78348 528 aa19.92■□□□□ 0.78
PRPF40A-209ENST00000486100 RESP18Q5W5W9 173 aa19.92■□□□□ 0.78
PRPF40A-209ENST00000486100 OVOS1Q6IE37 1185 aa19.92■□□□□ 0.78
PRPF40A-209ENST00000486100 BRSK2Q8IWQ3 736 aa19.92■□□□□ 0.78
PRPF40A-209ENST00000486100 EFCAB13Q8IY85 973 aa19.92■□□□□ 0.78
PRPF40A-209ENST00000486100 ZSWIM2Q8NEG5 633 aa19.92■□□□□ 0.78
PRPF40A-209ENST00000486100 SAAL1Q96ER3 474 aa19.92■□□□□ 0.78
PRPF40A-209ENST00000486100 CBWD1Q9BRT8 395 aa19.92■□□□□ 0.78
PRPF40A-209ENST00000486100 MFSD1Q9H3U5 465 aa19.92■□□□□ 0.78
PRPF40A-209ENST00000486100 FBXL21Q9UKT6 434 aa19.92■□□□□ 0.78
PRPF40A-209ENST00000486100 MRPS23Q9Y3D9 190 aaKnown RBP19.92■□□□□ 0.78
PRPF40A-209ENST00000486100 NUMBLQ9Y6R0 609 aa19.92■□□□□ 0.78
PRPF40A-209ENST00000486100 KIAA0391O15091 583 aaKnown RBP19.91■□□□□ 0.78
PRPF40A-209ENST00000486100 EXTL3O43909 919 aa19.91■□□□□ 0.78
PRPF40A-209ENST00000486100 SRFP11831 508 aa19.91■□□□□ 0.78
PRPF40A-209ENST00000486100 NUBP1P53384 320 aa19.91■□□□□ 0.78
PRPF40A-209ENST00000486100 GPR17Q13304 367 aa19.91■□□□□ 0.78
PRPF40A-209ENST00000486100 MYBPC2Q14324 1141 aa19.91■□□□□ 0.78
PRPF40A-209ENST00000486100 PARM1Q6UWI2 310 aa19.91■□□□□ 0.78
PRPF40A-209ENST00000486100 GLIS3Q8NEA6 775 aa19.91■□□□□ 0.78
PRPF40A-209ENST00000486100 PRSS33Q8NF86 280 aa19.91■□□□□ 0.78
PRPF40A-209ENST00000486100 HPS3Q969F9 1004 aa19.91■□□□□ 0.78
PRPF40A-209ENST00000486100 PCIF1Q9H4Z3 704 aa19.91■□□□□ 0.78
PRPF40A-209ENST00000486100 DSEQ9UL01 958 aa19.91■□□□□ 0.78
PRPF40A-209ENST00000486100 CYP11A1P05108 521 aa19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 OR4Q2P0C623 313 aa19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 TAF6P49848 677 aa19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 CLCN5P51795 746 aa19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 WNT7BP56706 349 aa19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 ASTLQ6HA08 431 aaPredicted RBP19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 ARMCX5Q6P1M9 558 aa19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 MTSS1LQ765P7 747 aa19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 NPAS3Q8IXF0 933 aa19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 ELMOD1Q8N336 334 aa19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 ST13P5Q8NFI4 369 aaPredicted RBP19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 ZNF507Q8TCN5 953 aa19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 CACTINQ8WUQ7 758 aaKnown RBP19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 FGF14Q92915 247 aa19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 BORCS6Q96GS4 357 aa19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 ZNF512Q96ME7 567 aaPredicted RBP19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 CORO1BQ9BR76 489 aa19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 PYM1Q9BRP8 204 aaKnown RBP19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 RPP25Q9BUL9 199 aaKnown RBP19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 RBAKQ9NYW8 714 aaPredicted RBP19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 GDE1Q9NZC3 331 aa19.9■□□□□ 0.78
PRPF40A-209ENST00000486100 GOLGA8IPA6NC78 632 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 GOLGA8JA6NMD2 632 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 TULP1O00294 542 aaPredicted RBP19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 CYB561D2O14569 222 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 ZNF197O14709 1029 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 EIF3DO15371 548 aaKnown RBP eCLIP19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 MICAL2O94851 1124 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 CFHP08603 1231 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 NPR3P17342 541 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 TFAMQ00059 246 aaKnown RBP19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 NHLH1Q02575 133 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 TWF1Q12792 350 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 PDCD11Q14690 1871 aaKnown RBP19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 SLC5A9Q2M3M2 681 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms