RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 VSTM1Q6UX27 236 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 SPATA21Q7Z572 469 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 TBC1D1Q86TI0 1168 aaPredicted RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 NELFCDQ8IXH7 590 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 SLFN12Q8IYM2 578 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 TEX9Q8N6V9 391 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 SYT2Q8N9I0 419 aaPredicted RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 ERMNQ8TAM6 284 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 SLC35G2Q8TBE7 412 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 ETNPPLQ8TBG4 499 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 FBXO25Q8TCJ0 367 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 U2AF1L4Q8WU68 220 aaKnown RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 TMEM174Q8WUU8 243 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 CKAP2Q8WWK9 683 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 TCP11Q8WWU5 503 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 CRYGNQ8WXF5 182 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 ALG3Q92685 438 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 GRAMD1AQ96CP6 724 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 CEP95Q96GE4 821 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 TMEM237Q96Q45 408 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 PRMT1Q99873 361 aaKnown RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 ELAC2Q9BQ52 826 aaKnown RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 ZSWIM1Q9BR11 485 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 REEP2Q9BRK0 252 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 GPR88Q9GZN0 384 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 NYXQ9GZU5 481 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 TAOK3Q9H2K8 898 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 CPVLQ9H3G5 476 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 ERVK-5Q9HDB9 667 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 OLFML3Q9NRN5 406 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 ADAM22Q9P0K1 906 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 WHRNQ9P202 907 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 CNTN3Q9P232 1028 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 USTQ9Y2C2 406 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 ACTL7BQ9Y614 415 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 MYH14Q7Z406 1995 aaKnown RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 MROH7Q68CQ1 1323 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 CNTNAP4Q9C0A0 1308 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 NPHP3-ACAD11A0A0J9YXS1 232 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 SCO2A0A1W2PP80 73 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 LINC01387J3KSC0 135 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 RASGRF2O14827 1237 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 TGFB1I1O43294 461 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 AHCYL1O43865 530 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 PPP1R11O60927 126 aaPredicted RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 ATP2C2O75185 946 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 MED24O75448 989 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 ATP5HO75947 161 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 EYA4O95677 639 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 KRT18P05783 430 aaKnown RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 FESP07332 822 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 VIMP08670 466 aaKnown RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 KRT16P08779 473 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 CLTAP09496 248 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 ATP2A2P16615 1042 aaKnown RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 RPA1P27694 616 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 MAN1A1P33908 653 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 RFC4P35249 363 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 PSMC2P35998 433 aaKnown RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 MSH2P43246 934 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 IREB2P48200 963 aaKnown RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 PEX5P50542 639 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 CCNHP51946 323 aaPredicted RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 SLC18A1P54219 525 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 PLTPP55058 493 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 CAV1Q03135 178 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 GABPAQ06546 454 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 AP3B2Q13367 1082 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 MYBPC2Q14324 1141 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 SLC29A2Q14542 456 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 SIX1Q15475 284 aaPredicted RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 ENOX2Q16206 610 aaKnown RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 SGSM1Q2NKQ1 1148 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 Q4G0T1 1027 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 FAM133BQ5BKY9 247 aaKnown RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 ANKRD20A2Q5SQ80 823 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 GPATCH4Q5T3I0 446 aaKnown RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 ANKRD20A1Q5TYW2 823 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 ANKRD20A3Q5VUR7 823 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 NAIF1Q69YI7 327 aaPredicted RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 CAPRIN2Q6IMN6 1127 aaKnown RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 MIS18BP1Q6P0N0 1132 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 TTC27Q6P3X3 843 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 IGF2-ASQ6U949 168 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 RGS9BPQ6ZS82 235 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 SYDE1Q6ZW31 735 aaPredicted RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 PNMA8AQ86V59 439 aaPredicted RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 EXOC3L1Q86VI1 746 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 SFR1Q86XK3 245 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 RELL1Q8IUW5 271 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 GLYCTKQ8IVS8 523 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 AGGF1Q8N302 714 aaeCLIP5.01□□□□□ -1.612e-7■□□□□ 9.4
SMARCC1-206ENST00000485737 UBL4BQ8N7F7 174 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 ENDOVQ8N8Q3 282 aaKnown RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 C1orf127Q8N9H9 656 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 EPS8L3Q8TE67 593 aaKnown RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 ZNF483Q8TF39 744 aaPredicted RBP5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 INPP5DQ92835 1189 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 GLG1Q92896 1179 aa5.01□□□□□ -1.61
SMARCC1-206ENST00000485737 CD101Q93033 1021 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms