RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 PGLYRP2Q96PD5 576 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 MAFFQ9ULX9 164 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 SMC3Q9UQE7 1217 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 YIPF1Q9Y548 306 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 K7ENM7 598 aa20.92■□□□□ 0.94
COL27A1-205ENST00000485397 PPEF2O14830 753 aa20.92■□□□□ 0.94
COL27A1-205ENST00000485397 HNRNPDLO14979 420 aaKnown RBP20.92■□□□□ 0.94
COL27A1-205ENST00000485397 SLC26A4O43511 780 aa20.92■□□□□ 0.94
COL27A1-205ENST00000485397 AARSP49588 968 aaKnown RBP eCLIP20.92■□□□□ 0.94
COL27A1-205ENST00000485397 CSTF1Q05048 431 aaKnown RBP20.92■□□□□ 0.94
COL27A1-205ENST00000485397 LARP1BQ659C4 914 aaKnown RBP20.92■□□□□ 0.94
COL27A1-205ENST00000485397 DSTYKQ6XUX3 929 aa20.92■□□□□ 0.94
COL27A1-205ENST00000485397 ZNF852Q6ZMS4 543 aa20.92■□□□□ 0.94
COL27A1-205ENST00000485397 BEST2Q8NFU1 509 aa20.92■□□□□ 0.94
COL27A1-205ENST00000485397 CLDN23Q96B33 292 aa20.92■□□□□ 0.94
COL27A1-205ENST00000485397 FAM212AQ96EL1 285 aa20.92■□□□□ 0.94
COL27A1-205ENST00000485397 NELL2Q99435 816 aa20.92■□□□□ 0.94
COL27A1-205ENST00000485397 TRMT61BQ9BVS5 477 aaKnown RBP20.92■□□□□ 0.94
COL27A1-205ENST00000485397 CRISPLD1Q9H336 500 aa20.92■□□□□ 0.94
COL27A1-205ENST00000485397 BRD9Q9H8M2 597 aa20.92■□□□□ 0.94
COL27A1-205ENST00000485397 RPF1Q9H9Y2 349 aaKnown RBP20.92■□□□□ 0.94
COL27A1-205ENST00000485397 OGTO15294 1046 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 PIGRP01833 764 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 PLCG1P19174 1290 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 VIPR2P41587 438 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 ZNF131P52739 623 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 EPHA5P54756 1037 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 FZD5Q13467 585 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 KARSQ15046 597 aaKnown RBP20.91■□□□□ 0.94
COL27A1-205ENST00000485397 TEAD2Q15562 447 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 KYAT1Q16773 422 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 SLC39A4Q6P5W5 647 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 VITQ6UXI7 678 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 USP37Q86T82 979 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 KIAA2013Q8IYS2 634 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 DCLK2Q8N568 766 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 DNASE1L2Q92874 299 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 SMARCD2Q92925 531 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 ZHX3Q9H4I2 956 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 PARVGQ9HBI0 331 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 ASAH2Q9NR71 780 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 FBXO4Q9UKT5 387 aa20.91■□□□□ 0.94
COL27A1-205ENST00000485397 FANCMQ8IYD8 2048 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 A0A0B4J269 797 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 NCAM2O15394 837 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 TRAK2O60296 914 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 KRT18P05783 430 aaKnown RBP20.9■□□□□ 0.94
COL27A1-205ENST00000485397 ADRB2P07550 413 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 NMT1P30419 496 aaKnown RBP20.9■□□□□ 0.94
COL27A1-205ENST00000485397 MAGEA9P43362 315 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 DUSP4Q13115 394 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 ZNF528Q3MIS6 628 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 SPATA1Q5VX52 437 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 SUMF1Q8NBK3 374 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 SHKBP1Q8TBC3 707 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 ZSCAN18Q8TBC5 510 aaPredicted RBP20.9■□□□□ 0.94
COL27A1-205ENST00000485397 RAD54LQ92698 747 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 FIZ1Q96SL8 496 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 HINFPQ9BQA5 517 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 MSTO1Q9BUK6 570 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 LRRC3Q9BY71 257 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 DNAJC25Q9H1X3 360 aa20.9■□□□□ 0.94
COL27A1-205ENST00000485397 NDRG2Q9UN36 371 aaKnown RBP20.9■□□□□ 0.94
COL27A1-205ENST00000485397 MRPS17Q9Y2R5 130 aaKnown RBP20.9■□□□□ 0.94
COL27A1-205ENST00000485397 NCANO14594 1321 aa20.89■□□□□ 0.93
COL27A1-205ENST00000485397 OR6C75A6NL08 312 aa20.89■□□□□ 0.93
COL27A1-205ENST00000485397 XPOTO43592 962 aaKnown RBP20.89■□□□□ 0.93
COL27A1-205ENST00000485397 KINO60870 393 aaKnown RBP20.89■□□□□ 0.93
COL27A1-205ENST00000485397 PSMC3P17980 439 aa20.89■□□□□ 0.93
COL27A1-205ENST00000485397 GDI1P31150 447 aa20.89■□□□□ 0.93
COL27A1-205ENST00000485397 FOXK2Q01167 660 aa20.89■□□□□ 0.93
COL27A1-205ENST00000485397 GPR17Q13304 367 aa20.89■□□□□ 0.93
COL27A1-205ENST00000485397 JADE1Q6IE81 842 aa20.89■□□□□ 0.93
COL27A1-205ENST00000485397 TSSK4Q6SA08 328 aa20.89■□□□□ 0.93
COL27A1-205ENST00000485397 MAP4K3Q8IVH8 894 aa20.89■□□□□ 0.93
COL27A1-205ENST00000485397 LEMD2Q8NC56 503 aa20.89■□□□□ 0.93
COL27A1-205ENST00000485397 RASSF8Q8NHQ8 419 aa20.89■□□□□ 0.93
COL27A1-205ENST00000485397 TMEM209Q96SK2 561 aa20.89■□□□□ 0.93
COL27A1-205ENST00000485397 OXCT2Q9BYC2 517 aaPredicted RBP20.89■□□□□ 0.93
COL27A1-205ENST00000485397 ZNF334Q9HCZ1 680 aaPredicted RBP20.89■□□□□ 0.93
COL27A1-205ENST00000485397 CPSF3Q9UKF6 684 aaKnown RBP20.89■□□□□ 0.93
COL27A1-205ENST00000485397 SLC27A5Q9Y2P5 690 aa20.89■□□□□ 0.93
COL27A1-205ENST00000485397 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.89■□□□□ 0.93
COL27A1-205ENST00000485397 ANKRD63C9JTQ0 380 aa20.88■□□□□ 0.93
COL27A1-205ENST00000485397 SPTLC1O15269 473 aa20.88■□□□□ 0.93
COL27A1-205ENST00000485397 NFICP08651 508 aa20.88■□□□□ 0.93
COL27A1-205ENST00000485397 TYMPP19971 482 aa20.88■□□□□ 0.93
COL27A1-205ENST00000485397 LONP1P36776 959 aaKnown RBP20.88■□□□□ 0.93
COL27A1-205ENST00000485397 RPS9P46781 194 aaKnown RBP20.88■□□□□ 0.93
COL27A1-205ENST00000485397 MCM2P49736 904 aa20.88■□□□□ 0.93
COL27A1-205ENST00000485397 LILRA4P59901 499 aa20.88■□□□□ 0.93
COL27A1-205ENST00000485397 SF3A1Q15459 793 aaKnown RBP20.88■□□□□ 0.93
COL27A1-205ENST00000485397 OVOS1Q6IE37 1185 aa20.88■□□□□ 0.93
COL27A1-205ENST00000485397 CENPPQ6IPU0 288 aa20.88■□□□□ 0.93
COL27A1-205ENST00000485397 TMC8Q8IU68 726 aa20.88■□□□□ 0.93
COL27A1-205ENST00000485397 ATAD1Q8NBU5 361 aa20.88■□□□□ 0.93
COL27A1-205ENST00000485397 RUBCNQ92622 972 aa20.88■□□□□ 0.93
COL27A1-205ENST00000485397 IRF7Q92985 503 aa20.88■□□□□ 0.93
COL27A1-205ENST00000485397 SENP8Q96LD8 212 aa20.88■□□□□ 0.93
COL27A1-205ENST00000485397 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms