RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 LONP2Q86WA8 852 aa14.11□□□□□ -0.15
UBR4-213ENST00000483922 DEPDC1BQ8WUY9 529 aa14.11□□□□□ -0.15
UBR4-213ENST00000483922 ZFYVE19Q96K21 471 aa14.11□□□□□ -0.15
UBR4-213ENST00000483922 CEP295Q9C0D2 2601 aa14.11□□□□□ -0.15
UBR4-213ENST00000483922 BRMS1Q9HCU9 246 aa14.11□□□□□ -0.15
UBR4-213ENST00000483922 GTSE1Q9NYZ3 720 aa14.11□□□□□ -0.15
UBR4-213ENST00000483922 ARHGAP28Q9P2N2 729 aa14.11□□□□□ -0.15
UBR4-213ENST00000483922 TUBGCP4Q9UGJ1 667 aa14.11□□□□□ -0.15
UBR4-213ENST00000483922 RAB23Q9ULC3 237 aa14.11□□□□□ -0.15
UBR4-213ENST00000483922 A0A1W2PRU2 124 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 MYBPHLA2RUH7 354 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 SFI1A8K8P3 1242 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 E9PMD0 336 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 CHADO15335 359 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 RPL9P32969 192 aaKnown RBP14.1□□□□□ -0.15
UBR4-213ENST00000483922 SPAG1Q07617 926 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 NBR1Q14596 966 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 PPP2R5AQ15172 486 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 SF3A2Q15428 464 aaKnown RBP14.1□□□□□ -0.15
UBR4-213ENST00000483922 ZNF568Q3ZCX4 644 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 IQCEQ6IPM2 695 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 GAREM2Q75VX8 874 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 KIFAP3Q92845 792 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 CHFRQ96EP1 664 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 IFT74Q96LB3 600 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 ACAP3Q96P50 834 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 PGLYRP2Q96PD5 576 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 CCDC94Q9BW85 323 aaPredicted RBP14.1□□□□□ -0.15
UBR4-213ENST00000483922 TMEM134Q9H6X4 195 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 POLR3BQ9NW08 1133 aaPredicted RBP14.1□□□□□ -0.15
UBR4-213ENST00000483922 KIAA1024Q9UPX6 916 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 YIPF1Q9Y548 306 aa14.1□□□□□ -0.15
UBR4-213ENST00000483922 CCDC169A6NNP5 214 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 SPECC1L-ADORA2AF8WAN1 911 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 M0QZQ0 153 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 AXIN1O15169 862 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 EXTL3O43909 919 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 OAZ2O95190 189 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 OR52Z1P0C646 297 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 MCF2P10911 925 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 PMLP29590 882 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 YARSP54577 528 aaKnown RBP14.09□□□□□ -0.15
UBR4-213ENST00000483922 CACNB1Q02641 598 aaPredicted RBP14.09□□□□□ -0.15
UBR4-213ENST00000483922 TNK2Q07912 1038 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 DUSP4Q13115 394 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 CCINQ13939 588 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 ZBTB6Q15916 424 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 IL17AQ16552 155 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 KCNK18Q7Z418 384 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 ARID3BQ8IVW6 561 aaPredicted RBP14.09□□□□□ -0.15
UBR4-213ENST00000483922 TTC9BQ8N6N2 239 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 TMEM209Q96SK2 561 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 RUSC1Q9BVN2 902 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 ASAH2Q9NR71 780 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 TOPORSQ9NS56 1045 aaPredicted RBP14.09□□□□□ -0.15
UBR4-213ENST00000483922 SLC38A7Q9NVC3 462 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 PCDHB8Q9UN66 801 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 SLC27A5Q9Y2P5 690 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 NUB1Q9Y5A7 615 aa14.09□□□□□ -0.15
UBR4-213ENST00000483922 PDCD11Q14690 1871 aaKnown RBP14.08□□□□□ -0.16
UBR4-213ENST00000483922 PP2D1A8MPX8 630 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 PPEF2O14830 753 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 SOAT2O75908 522 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 MUTP22033 750 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 CTHP32929 405 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 CNR2P34972 360 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 CCT6AP40227 531 aaKnown RBP14.08□□□□□ -0.16
UBR4-213ENST00000483922 PXNP49023 591 aaPredicted RBP14.08□□□□□ -0.16
UBR4-213ENST00000483922 CDR1P51861 262 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 PPP2R5DQ14738 602 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 PON2Q15165 354 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 ZNF280DQ6N043 979 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 WDR5BQ86VZ2 330 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 ELMOD1Q8N336 334 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 CHAMP1Q96JM3 812 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 MRPL4Q9BYD3 311 aaKnown RBP14.08□□□□□ -0.16
UBR4-213ENST00000483922 ARRDC1-AS1Q9H2J1 176 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 SMOC1Q9H4F8 434 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 DDX19AQ9NUU7 478 aaKnown RBP14.08□□□□□ -0.16
UBR4-213ENST00000483922 MAFFQ9ULX9 164 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 PHLPP2Q6ZVD8 1323 aa14.08□□□□□ -0.16
UBR4-213ENST00000483922 CNOT1A5YKK6 2376 aaKnown RBP14.07□□□□□ -0.16
UBR4-213ENST00000483922 OTOL1A6NHN0 477 aaPredicted RBP14.07□□□□□ -0.16
UBR4-213ENST00000483922 SLC16A4O15374 487 aa14.07□□□□□ -0.16
UBR4-213ENST00000483922 HIP1RO75146 1068 aa14.07□□□□□ -0.16
UBR4-213ENST00000483922 CPB1P15086 417 aa14.07□□□□□ -0.16
UBR4-213ENST00000483922 CDC25AP30304 524 aa14.07□□□□□ -0.16
UBR4-213ENST00000483922 HOXA6P31267 233 aa14.07□□□□□ -0.16
UBR4-213ENST00000483922 MCM4P33991 863 aa14.07□□□□□ -0.16
UBR4-213ENST00000483922 RAP1GAPP47736 663 aa14.07□□□□□ -0.16
UBR4-213ENST00000483922 AARSP49588 968 aaKnown RBP eCLIP14.07□□□□□ -0.165e-9■■■■□ 21
UBR4-213ENST00000483922 TOB1P50616 345 aaPredicted RBP14.07□□□□□ -0.16
UBR4-213ENST00000483922 FXR2P51116 673 aaKnown RBP eCLIP14.07□□□□□ -0.168e-9■■■■□ 25.6
UBR4-213ENST00000483922 GUCY2FP51841 1108 aa14.07□□□□□ -0.16
UBR4-213ENST00000483922 KPNA1P52294 538 aaPredicted RBP14.07□□□□□ -0.16
UBR4-213ENST00000483922 CENPPQ6IPU0 288 aa14.07□□□□□ -0.16
UBR4-213ENST00000483922 RINT1Q6NUQ1 792 aa14.07□□□□□ -0.16
UBR4-213ENST00000483922 MPZL3Q6UWV2 235 aa14.07□□□□□ -0.16
UBR4-213ENST00000483922 C1orf186Q6ZWK4 172 aa14.07□□□□□ -0.16
UBR4-213ENST00000483922 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms