RNA–Protein interactions for RNA: ENST00000483773.1

FBXO28-203, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-203ENST00000483773 YME1L1Q96TA2 773 aa13.84□□□□□ -0.19
FBXO28-203ENST00000483773 RAD9AQ99638 391 aa13.84□□□□□ -0.19
FBXO28-203ENST00000483773 ZBED2Q9BTP6 218 aa13.84□□□□□ -0.19
FBXO28-203ENST00000483773 NAA15Q9BXJ9 866 aaKnown RBP13.84□□□□□ -0.19
FBXO28-203ENST00000483773 PLAGL2Q9UPG8 496 aa13.84□□□□□ -0.19
FBXO28-203ENST00000483773 FAN1Q9Y2M0 1017 aa13.84□□□□□ -0.19
FBXO28-203ENST00000483773 NUB1Q9Y5A7 615 aa13.84□□□□□ -0.19
FBXO28-203ENST00000483773 TDRD15B5MCY1 1934 aaKnown RBP13.84□□□□□ -0.19
FBXO28-203ENST00000483773 HUS1O60921 280 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 TACC1O75410 805 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 B3GAT3O94766 335 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 FERP16591 822 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 ATP2A2P16615 1042 aaKnown RBP13.83□□□□□ -0.2
FBXO28-203ENST00000483773 LAG3P18627 525 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 HNRNPH3P31942 346 aaKnown RBP13.83□□□□□ -0.2
FBXO28-203ENST00000483773 CASP14P31944 242 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 KRT9P35527 623 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 AARSP49588 968 aaKnown RBP eCLIP13.83□□□□□ -0.2
FBXO28-203ENST00000483773 AFF1P51825 1210 aaKnown RBP13.83□□□□□ -0.2
FBXO28-203ENST00000483773 DEFB103AP81534 67 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 BTG3Q14201 252 aaPredicted RBP13.83□□□□□ -0.2
FBXO28-203ENST00000483773 HERC6Q8IVU3 1022 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 APPL2Q8NEU8 664 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 SHC3Q92529 594 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 DNAJC7Q99615 494 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 BCO2Q9BYV7 579 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 CXCL16Q9H2A7 254 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 NRDE2Q9H7Z3 1164 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 AIPL1Q9NZN9 384 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 KIAA1257Q9ULG3 409 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 RWDD3Q9Y3V2 267 aa13.83□□□□□ -0.2
FBXO28-203ENST00000483773 MFAP3LO75121 409 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 TADA2AO75478 443 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 DDHD2O94830 711 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 PTMAP06454 111 aaKnown RBP13.82□□□□□ -0.2
FBXO28-203ENST00000483773 ANXA13P27216 316 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 BMP8BP34820 402 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 PPM1AP35813 382 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 MAGEA10P43363 369 aaPredicted RBP13.82□□□□□ -0.2
FBXO28-203ENST00000483773 KLK7P49862 253 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 CLCNKBP51801 687 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 EPHB4P54760 987 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 JAM2P57087 298 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 CDK17Q00537 523 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 LRMPQ12912 555 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 RAPGEF1Q13905 1077 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 SFMBT2Q5VUG0 894 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 IQCEQ6IPM2 695 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 RRAGAQ7L523 313 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 LIMS2Q7Z4I7 341 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 UNC93AQ86WB7 457 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 METTL23Q86XA0 190 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 ZNF280BQ86YH2 543 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 SPC24Q8NBT2 197 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 CCDC112Q8NEF3 446 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 CPLX3Q8WVH0 158 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 TATDN2Q93075 761 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 MMS19Q96T76 1030 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 PI4K2AQ9BTU6 479 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 OXCT2Q9BYC2 517 aaPredicted RBP13.82□□□□□ -0.2
FBXO28-203ENST00000483773 RC3H2Q9HBD1 1191 aaKnown RBP13.82□□□□□ -0.2
FBXO28-203ENST00000483773 NLRC4Q9NPP4 1024 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 NXF1Q9UBU9 619 aaKnown RBP13.82□□□□□ -0.2
FBXO28-203ENST00000483773 CNTN6Q9UQ52 1028 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 SNX9Q9Y5X1 595 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 FHOD1Q9Y613 1164 aa13.82□□□□□ -0.2
FBXO28-203ENST00000483773 CASTOR2A6NHX0 329 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 M0QZQ0 153 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 CAPN15O75808 1086 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 GALTP07902 379 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 ODC1P11926 461 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 TYMPP19971 482 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 SOX5P35711 763 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 OR1G1P47890 313 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 LHX1P48742 406 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 FXR1P51114 621 aaKnown RBP eCLIP13.81□□□□□ -0.2
FBXO28-203ENST00000483773 GUCY2FP51841 1108 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 DRAP1Q14919 205 aaPredicted RBP13.81□□□□□ -0.2
FBXO28-203ENST00000483773 PDXDC1Q6P996 788 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 DSTYKQ6XUX3 929 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 FAM71AQ8IYT1 594 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 FIBCD1Q8N539 461 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
FBXO28-203ENST00000483773 BAP1Q92560 729 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 SUSD3Q96L08 255 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 ZNF558Q96NG5 402 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 GDF15Q99988 308 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 UBE2OQ9C0C9 1292 aaKnown RBP13.81□□□□□ -0.2
FBXO28-203ENST00000483773 GOLGA2P5Q9HBQ8 144 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 APOBEC3GQ9HC16 384 aaKnown RBP13.81□□□□□ -0.2
FBXO28-203ENST00000483773 PCDHB12Q9Y5F1 795 aa13.81□□□□□ -0.2
FBXO28-203ENST00000483773 FNDC1Q4ZHG4 1894 aaPredicted RBP13.8□□□□□ -0.2
FBXO28-203ENST00000483773 COL4A6Q14031 1691 aa13.8□□□□□ -0.2
FBXO28-203ENST00000483773 F8VZ95 297 aa13.8□□□□□ -0.2
FBXO28-203ENST00000483773 CYB561D2O14569 222 aa13.8□□□□□ -0.2
FBXO28-203ENST00000483773 NRP1O14786 923 aa13.8□□□□□ -0.2
FBXO28-203ENST00000483773 SYN3O14994 580 aa13.8□□□□□ -0.2
FBXO28-203ENST00000483773 EPHB6O15197 1021 aa13.8□□□□□ -0.2
FBXO28-203ENST00000483773 TLL1O43897 1013 aa13.8□□□□□ -0.2
FBXO28-203ENST00000483773 GFPT2O94808 682 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms