RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 CEP104O60308 925 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 CYP1A1P04798 512 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 KRT19P08727 400 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 TMEM191BP0C7N4 346 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 MCF2P10911 925 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 RRM1P23921 792 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 GNA15P30679 374 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 PAFAH1B1P43034 410 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 AP3M2P53677 418 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 HADHBP55084 474 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 CDH8P55286 799 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 TRIM32Q13049 653 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 TCEAL1Q15170 157 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 SGSM1Q2NKQ1 1148 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 AADACL2Q6P093 401 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 WDR93Q6P2C0 686 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 RHOT2Q8IXI1 618 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 GSPT2Q8IYD1 628 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 USP38Q8NB14 1042 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 TRIB2Q92519 343 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 ZNF653Q96CK0 615 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 NUP85Q9BW27 656 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 AP1M1Q9BXS5 423 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 ARFGAP3Q9NP61 516 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 NXF1Q9UBU9 619 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 TMEM59LQ9UK28 342 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 ANK1P16157 1881 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 KIAA0100Q14667 2235 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 TRIP12Q14669 1992 aaPredicted RBP9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 RRN3P2A6NIE6 340 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 TMEM110-MUSTN1A8MSY1 372 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 FKTNO75072 461 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 ERLIN2O94905 339 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 ITGB3P05106 788 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 MYL3P08590 195 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 ITGA4P13612 1032 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 COMTP21964 271 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 TBXAS1P24557 533 aaPredicted RBP9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 RAP1GAPP47736 663 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 LACTBP83111 547 aaPredicted RBP9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 SP3Q02447 781 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 ZNF211Q13398 564 aaPredicted RBP9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 TRPC3Q13507 836 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 MESDQ14696 234 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 BRD3Q15059 726 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 TRADDQ15628 312 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 ZNF699Q32M78 642 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 WDR72Q3MJ13 1102 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 MCOLN2Q8IZK6 566 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 SYCE1Q8N0S2 351 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 HNRNPLLQ8WVV9 542 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 ZNF606Q8WXB4 792 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 TFAP2BQ92481 460 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 ABHD8Q96I13 439 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 FAM81BQ96LP2 452 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 GDAP1L1Q96MZ0 367 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 EIF2AQ9BY44 585 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 IMPG2Q9BZV3 1241 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 NIF3L1Q9GZT8 377 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 CNOT8Q9UFF9 292 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 GTF3C4Q9UKN8 822 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 AMFRQ9UKV5 643 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 L1RE1Q9UN81 338 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 MTA2O94776 668 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 GLI1P08151 1106 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 CYP2C9P11712 490 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 FLT3LGP49771 235 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 PSEN2P49810 448 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 CBX1P83916 185 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 PURAQ00577 322 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 CENPCQ03188 943 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 ORC1Q13415 861 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 IRF5Q13568 498 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 SURF1Q15526 300 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 FSCN1Q16658 493 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 DAB2IPQ5VWQ8 1189 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 ZNF410Q86VK4 478 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 ZNF564Q8TBZ8 553 aaPredicted RBP9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 ACTRT1Q8TDG2 376 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 TAF4BQ92750 862 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 ZMAT2Q96NC0 199 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 SDCBP2Q9H190 292 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 RNF14Q9UBS8 474 aa9.44□□□□□ -0.9
CDC42SE1-204ENST00000483763 SMIM35A0A1B0GVV1 85 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 TARSL2A2RTX5 802 aaKnown RBP9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 CES2O00748 559 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 THAP12O43422 761 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 IL18RAPO95256 599 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 PGK1P00558 417 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 TNNC2P02585 160 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 CPT1AP50416 773 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 BPIFB4P59827 614 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 NOMO3P69849 1222 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 TMCO4Q5TGY1 634 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 MON1BQ7L1V2 547 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 ZNF677Q86XU0 584 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 RASGEF1CQ8N431 466 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 WDTC1Q8N5D0 677 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 CD101Q93033 1021 aa9.43□□□□□ -0.9
CDC42SE1-204ENST00000483763 ANKRD36BP1Q96IX9 119 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms