RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 ATP1A3P13637 1013 aa19.2■□□□□ 0.66
CPNE1-224ENST00000483359 FMO5P49326 533 aa19.2■□□□□ 0.66
CPNE1-224ENST00000483359 DSTYKQ6XUX3 929 aa19.2■□□□□ 0.66
CPNE1-224ENST00000483359 DDX53Q86TM3 631 aaKnown RBP19.2■□□□□ 0.66
CPNE1-224ENST00000483359 HPDLQ96IR7 371 aa19.2■□□□□ 0.66
CPNE1-224ENST00000483359 TCF25Q9BQ70 676 aa19.2■□□□□ 0.66
CPNE1-224ENST00000483359 TUBGCP2Q9BSJ2 902 aa19.2■□□□□ 0.66
CPNE1-224ENST00000483359 PI4K2AQ9BTU6 479 aa19.2■□□□□ 0.66
CPNE1-224ENST00000483359 ENTPD7Q9NQZ7 604 aa19.2■□□□□ 0.66
CPNE1-224ENST00000483359 TLR9Q9NR96 1032 aa19.2■□□□□ 0.66
CPNE1-224ENST00000483359 TAB2Q9NYJ8 693 aa19.2■□□□□ 0.66
CPNE1-224ENST00000483359 TIMM13Q9Y5L4 95 aaPredicted RBP19.2■□□□□ 0.66
CPNE1-224ENST00000483359 EYSQ5T1H1 3165 aa19.2■□□□□ 0.66
CPNE1-224ENST00000483359 HLA-DRAP01903 254 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 AFPP02771 609 aaKnown RBP19.19■□□□□ 0.66
CPNE1-224ENST00000483359 IRS1P35568 1242 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 ERVFC1P60507 584 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 MYL7Q01449 175 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 MYO1EQ12965 1108 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 CAMK1Q14012 370 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 SV2CQ496J9 727 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 LRRC52Q8N7C0 313 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 KPNA7A9QM74 516 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 TRAPPC3O43617 180 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 SOD2P04179 222 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 CDK11BP21127 795 aaKnown RBP19.19■□□□□ 0.66
CPNE1-224ENST00000483359 EEF1GP26641 437 aaKnown RBP19.19■□□□□ 0.66
CPNE1-224ENST00000483359 TKTP29401 623 aaKnown RBP19.19■□□□□ 0.66
CPNE1-224ENST00000483359 GTF2H1P32780 548 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 PNPLA4P41247 253 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 MAN2A1Q16706 1144 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 ZNF699Q32M78 642 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 PLPP4Q5VZY2 271 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 SPOPLQ6IQ16 392 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 TMC7Q7Z402 723 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 DEFB123Q8N688 67 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 MICAL1Q8TDZ2 1067 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 SNX9Q9Y5X1 595 aa19.19■□□□□ 0.66
CPNE1-224ENST00000483359 VWA8A3KMH1 1905 aa19.18■□□□□ 0.66
CPNE1-224ENST00000483359 CAVIN2O95810 425 aa19.18■□□□□ 0.66
CPNE1-224ENST00000483359 MCCD1P59942 119 aaPredicted RBP19.18■□□□□ 0.66
CPNE1-224ENST00000483359 KRT31Q15323 416 aa19.18■□□□□ 0.66
CPNE1-224ENST00000483359 RTP2Q5QGT7 225 aa19.18■□□□□ 0.66
CPNE1-224ENST00000483359 KIAA1841Q6NSI8 718 aa19.18■□□□□ 0.66
CPNE1-224ENST00000483359 RNF168Q8IYW5 571 aaPredicted RBP19.18■□□□□ 0.66
CPNE1-224ENST00000483359 SEMA4DQ92854 862 aa19.18■□□□□ 0.66
CPNE1-224ENST00000483359 SENP8Q96LD8 212 aa19.18■□□□□ 0.66
CPNE1-224ENST00000483359 ZBP1Q9H171 429 aa19.18■□□□□ 0.66
CPNE1-224ENST00000483359 NXF1Q9UBU9 619 aaKnown RBP19.18■□□□□ 0.66
CPNE1-224ENST00000483359 EFEMP2O95967 443 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 ZNF18P17022 549 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 AARSP49588 968 aaKnown RBP eCLIP19.17■□□□□ 0.66
CPNE1-224ENST00000483359 UBE3AQ05086 875 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 WDR72Q3MJ13 1102 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 FBXL13Q8NEE6 735 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 SUSD3Q96L08 255 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 HERC2P3Q9BVR0 1158 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 XYLT2Q9H1B5 865 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 VPS16Q9H269 839 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 LZTS1Q9Y250 596 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 ATG2AQ2TAZ0 1938 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 GOLGA6L19H0YKK7 550 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 CYB561D2O14569 222 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 URODP06132 367 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 IGFBP4P22692 258 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 GLUD2P49448 558 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 ELAVL2Q12926 359 aaKnown RBP19.17■□□□□ 0.66
CPNE1-224ENST00000483359 USP41Q3LFD5 358 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 MIIPQ5JXC2 388 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 SCARA5Q6ZMJ2 495 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 MMS19Q96T76 1030 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 TTPALQ9BTX7 342 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 IMPG2Q9BZV3 1241 aa19.17■□□□□ 0.66
CPNE1-224ENST00000483359 TSC2P49815 1807 aa19.16■□□□□ 0.66
CPNE1-224ENST00000483359 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.16■□□□□ 0.66
CPNE1-224ENST00000483359 ODC1P11926 461 aa19.16■□□□□ 0.66
CPNE1-224ENST00000483359 ADGRE1Q14246 886 aa19.16■□□□□ 0.66
CPNE1-224ENST00000483359 VWA3BQ502W6 1294 aa19.16■□□□□ 0.66
CPNE1-224ENST00000483359 PRSS55Q6UWB4 352 aaPredicted RBP19.16■□□□□ 0.66
CPNE1-224ENST00000483359 RIN2Q8WYP3 895 aaPredicted RBP19.16■□□□□ 0.66
CPNE1-224ENST00000483359 NDST4Q9H3R1 872 aa19.16■□□□□ 0.66
CPNE1-224ENST00000483359 RAB20Q9NX57 234 aa19.16■□□□□ 0.66
CPNE1-224ENST00000483359 POLIQ9UNA4 740 aa19.16■□□□□ 0.66
CPNE1-224ENST00000483359 HIDE1A8MVS5 230 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 M0QZQ0 153 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 N4BP1O75113 896 aaKnown RBP19.15■□□□□ 0.66
CPNE1-224ENST00000483359 TNNC1P63316 161 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 NOP14P78316 857 aaKnown RBP19.15■□□□□ 0.66
CPNE1-224ENST00000483359 LRMPQ12912 555 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 GPR153Q6NV75 609 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.15■□□□□ 0.66
CPNE1-224ENST00000483359 ANKRD20A12PQ8NF67 263 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 MYLIPQ8WY64 445 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 CRACR2AQ9BSW2 395 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 PCDHB8Q9UN66 801 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 REV3LO60673 3130 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 ASS1P00966 412 aaKnown RBP19.15■□□□□ 0.66
CPNE1-224ENST00000483359 CTSAP10619 480 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 FGFR3P22607 806 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 ATICP31939 592 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms