RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 PIAS3Q9Y6X2 628 aa15.17■□□□□ 0.02
VARS-226ENST00000483275 CACNA1BQ00975 2339 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 RALGAPA1Q6GYQ0 2036 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 ACACBO00763 2458 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 VWA3AA6NCI4 1184 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 TOM1L1O75674 476 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 GUCY2CP25092 1073 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 HOXC13P31276 330 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 RPS9P46781 194 aaKnown RBP15.16■□□□□ 0.02
VARS-226ENST00000483275 TPGS2Q68CL5 300 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 IQCEQ6IPM2 695 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 ELMOD1Q8N336 334 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 ZBTB44Q8NCP5 570 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 LRRC15Q8TF66 581 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 DNASE1L2Q92874 299 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 SMARCD2Q92925 531 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 ZNF512Q96ME7 567 aaPredicted RBP15.16■□□□□ 0.02
VARS-226ENST00000483275 TMEM209Q96SK2 561 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 DNAJC25Q9H1X3 360 aa15.16■□□□□ 0.02
VARS-226ENST00000483275 SH2B1Q9NRF2 756 aaPredicted RBP15.16■□□□□ 0.02
VARS-226ENST00000483275 A0A1W2PRU2 124 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 SLC38A8A6NNN8 435 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 ZNF197O14709 1029 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 LILRB5O75023 590 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 TDGF1P13385 188 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 CCNE1P24864 410 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 PRPHP41219 470 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 MAGEA9P43362 315 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 SLC12A3P55017 1021 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 YWHAHQ04917 246 aaPredicted RBP15.15■□□□□ 0.02
VARS-226ENST00000483275 MCL1Q07820 350 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 DMWDQ09019 674 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 DUSP4Q13115 394 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 DHX8Q14562 1220 aaKnown RBP15.15■□□□□ 0.02
VARS-226ENST00000483275 PUM1Q14671 1186 aaKnown RBP eCLIP15.15■□□□□ 0.02
VARS-226ENST00000483275 ARSHQ5FYA8 562 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 TMC8Q8IU68 726 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 MAP4K3Q8IVH8 894 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 APPL2Q8NEU8 664 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 SPIRE2Q8WWL2 714 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 NELL1Q92832 810 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 ZSCAN31Q96LW9 406 aaPredicted RBP15.15■□□□□ 0.02
VARS-226ENST00000483275 EPC1Q9H2F5 836 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 CHRDQ9H2X0 955 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 ZNF334Q9HCZ1 680 aaPredicted RBP15.15■□□□□ 0.02
VARS-226ENST00000483275 PARD6AQ9NPB6 346 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 RBM12Q9NTZ6 932 aaKnown RBP15.15■□□□□ 0.02
VARS-226ENST00000483275 DLL3Q9NYJ7 618 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 SLC27A5Q9Y2P5 690 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 MRPS17Q9Y2R5 130 aaKnown RBP15.15■□□□□ 0.02
VARS-226ENST00000483275 ATG2BQ96BY7 2078 aa15.15■□□□□ 0.02
VARS-226ENST00000483275 ZNF638Q14966 1978 aaKnown RBP15.15■□□□□ 0.02
VARS-226ENST00000483275 OBSL1O75147 1896 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 TTC26A0AVF1 554 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 HEPACAM2A8MVW5 462 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 LACTBL1A8MY62 500 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 M0QZQ0 153 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 NCAM2O15394 837 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 CLDN3O15551 220 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 PLA2G4BP0C869 781 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 PSMC3P17980 439 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 MARCKSP29966 332 aaPredicted RBP15.14■□□□□ 0.01
VARS-226ENST00000483275 ATP2C1P98194 919 aaPredicted RBP15.14■□□□□ 0.01
VARS-226ENST00000483275 SATB1Q01826 763 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 SRSF5Q13243 272 aaKnown RBP15.14■□□□□ 0.01
VARS-226ENST00000483275 GAS6Q14393 721 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 ENOX2Q16206 610 aaKnown RBP15.14■□□□□ 0.01
VARS-226ENST00000483275 WDR44Q5JSH3 913 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 Q6ZS52 159 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 FAM3CQ92520 227 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 FAM212AQ96EL1 285 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 ZFYVE19Q96K21 471 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 NELL2Q99435 816 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 C17orf75Q9HAS0 396 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 LMAN1LQ9HAT1 526 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 C2orf42Q9NWW7 574 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 USP18Q9UMW8 372 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 STK24Q9Y6E0 443 aa15.14■□□□□ 0.01
VARS-226ENST00000483275 DENND4CQ5VZ89 1909 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 SDK1Q7Z5N4 2213 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 K7ENM7 598 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 ARNTLO00327 626 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 LAD1O00515 517 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 ZNF263O14978 683 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 FAM189A1O60320 539 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 CLTAP09496 248 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 MAP1BP46821 2468 aaKnown RBP15.13■□□□□ 0.01
VARS-226ENST00000483275 LIG4P49917 911 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 SMTNP53814 917 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 EPHA5P54756 1037 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 PPP2R3AQ06190 1150 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 TMEM119Q4V9L6 283 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 HYIQ5T013 277 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 ZPBP2Q6X784 338 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 DSTYKQ6XUX3 929 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 HAUS6Q7Z4H7 955 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 SYT2Q8N9I0 419 aaPredicted RBP15.13■□□□□ 0.01
VARS-226ENST00000483275 ATAD1Q8NBU5 361 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 BEST2Q8NFU1 509 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 IRF7Q92985 503 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms