RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 PTPN5P54829 565 aa21.54■■□□□ 1.04
MSH5-215ENST00000482280 ADCY1Q08828 1119 aa21.54■■□□□ 1.04
MSH5-215ENST00000482280 C9orf57Q5W0N0 161 aa21.54■■□□□ 1.04
MSH5-215ENST00000482280 NT5DC4Q86YG4 428 aa21.54■■□□□ 1.04
MSH5-215ENST00000482280 FLCNQ8NFG4 579 aa21.54■■□□□ 1.04
MSH5-215ENST00000482280 CACTINQ8WUQ7 758 aaKnown RBP21.54■■□□□ 1.04
MSH5-215ENST00000482280 RSAD2Q8WXG1 361 aa21.54■■□□□ 1.04
MSH5-215ENST00000482280 FGF13Q92913 245 aa21.54■■□□□ 1.04
MSH5-215ENST00000482280 ZNF512Q96ME7 567 aaPredicted RBP21.54■■□□□ 1.04
MSH5-215ENST00000482280 IRF2BPLQ9H1B7 796 aa21.54■■□□□ 1.04
MSH5-215ENST00000482280 DPP3Q9NY33 737 aa21.54■■□□□ 1.04
MSH5-215ENST00000482280 INSL5Q9Y5Q6 135 aa21.54■■□□□ 1.04
MSH5-215ENST00000482280 MTCL1Q9Y4B5 1905 aaKnown RBP21.54■■□□□ 1.04
MSH5-215ENST00000482280 TECTAO75443 2155 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 FRMD3A2A2Y4 597 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 ZNF197O14709 1029 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 KIAA0391O15091 583 aaKnown RBP21.53■■□□□ 1.04
MSH5-215ENST00000482280 TBC1D4O60343 1298 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 OAZ2O95190 189 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 CFHP08603 1231 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 SRFP11831 508 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 TYMPP19971 482 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 LILRA4P59901 499 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 PLD1Q13393 1074 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 CYP4A22Q5TCH4 519 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 CEP57L1Q8IYX8 460 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 SLC44A3Q8N4M1 653 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 ZNF560Q96MR9 790 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 CORO1BQ9BR76 489 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 STRA6Q9BX79 667 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 HCFC1R1Q9NWW0 138 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 RBAKQ9NYW8 714 aaPredicted RBP21.53■■□□□ 1.04
MSH5-215ENST00000482280 DNMT3BQ9UBC3 853 aaKnown RBP21.53■■□□□ 1.04
MSH5-215ENST00000482280 NUMBLQ9Y6R0 609 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 VWA8A3KMH1 1905 aa21.53■■□□□ 1.04
MSH5-215ENST00000482280 POLR2DO15514 142 aaKnown RBP21.52■■□□□ 1.04
MSH5-215ENST00000482280 PRPF6O94906 941 aaKnown RBP21.52■■□□□ 1.04
MSH5-215ENST00000482280 PDGFBP01127 241 aaPredicted RBP21.52■■□□□ 1.04
MSH5-215ENST00000482280 RHOP08100 348 aa21.52■■□□□ 1.04
MSH5-215ENST00000482280 AARSP49588 968 aaKnown RBP eCLIP21.52■■□□□ 1.043e-7■■■■■ 72.1
MSH5-215ENST00000482280 TAF6P49848 677 aa21.52■■□□□ 1.04
MSH5-215ENST00000482280 NUBP1P53384 320 aa21.52■■□□□ 1.04
MSH5-215ENST00000482280 TFAMQ00059 246 aaKnown RBP21.52■■□□□ 1.04
MSH5-215ENST00000482280 KCNA1Q09470 495 aa21.52■■□□□ 1.04
MSH5-215ENST00000482280 ASTLQ6HA08 431 aaPredicted RBP21.52■■□□□ 1.04
MSH5-215ENST00000482280 SHC4Q6S5L8 630 aa21.52■■□□□ 1.04
MSH5-215ENST00000482280 PDZD4Q76G19 769 aaPredicted RBP21.52■■□□□ 1.04
MSH5-215ENST00000482280 SIX5Q8N196 739 aa21.52■■□□□ 1.04
MSH5-215ENST00000482280 THEM5Q8N1Q8 247 aa21.52■■□□□ 1.04
MSH5-215ENST00000482280 SAAL1Q96ER3 474 aa21.52■■□□□ 1.04
MSH5-215ENST00000482280 SENP8Q96LD8 212 aa21.52■■□□□ 1.04
MSH5-215ENST00000482280 TRIM9Q9C026 710 aa21.52■■□□□ 1.04
MSH5-215ENST00000482280 KBTBD4Q9NVX7 518 aa21.52■■□□□ 1.04
MSH5-215ENST00000482280 WNT16Q9UBV4 365 aa21.52■■□□□ 1.04
MSH5-215ENST00000482280 ADSSP30520 456 aa21.51■■□□□ 1.03
MSH5-215ENST00000482280 PNPLA4P41247 253 aa21.51■■□□□ 1.03
MSH5-215ENST00000482280 CASP5P51878 434 aa21.51■■□□□ 1.03
MSH5-215ENST00000482280 VCPP55072 806 aaKnown RBP21.51■■□□□ 1.03
MSH5-215ENST00000482280 HTR4Q13639 388 aa21.51■■□□□ 1.03
MSH5-215ENST00000482280 SV2CQ496J9 727 aa21.51■■□□□ 1.03
MSH5-215ENST00000482280 LEMD2Q8NC56 503 aa21.51■■□□□ 1.03
MSH5-215ENST00000482280 ITFG1Q8TB96 612 aa21.51■■□□□ 1.03
MSH5-215ENST00000482280 ING5Q8WYH8 240 aa21.51■■□□□ 1.03
MSH5-215ENST00000482280 IKZF4Q9H2S9 585 aa21.51■■□□□ 1.03
MSH5-215ENST00000482280 ATP6V1DQ9Y5K8 247 aa21.51■■□□□ 1.03
MSH5-215ENST00000482280 ANHXE9PGG2 379 aa21.5■■□□□ 1.03
MSH5-215ENST00000482280 PIRO00625 290 aa21.5■■□□□ 1.03
MSH5-215ENST00000482280 NARSO43776 548 aaKnown RBP21.5■■□□□ 1.03
MSH5-215ENST00000482280 EXTL3O43909 919 aa21.5■■□□□ 1.03
MSH5-215ENST00000482280 ALDH1A3P47895 512 aa21.5■■□□□ 1.03
MSH5-215ENST00000482280 CLCN5P51795 746 aa21.5■■□□□ 1.03
MSH5-215ENST00000482280 DNM1Q05193 864 aaKnown RBP21.5■■□□□ 1.03
MSH5-215ENST00000482280 TWF1Q12792 350 aa21.5■■□□□ 1.03
MSH5-215ENST00000482280 MYBPC2Q14324 1141 aa21.5■■□□□ 1.03
MSH5-215ENST00000482280 E2F4Q16254 413 aa21.5■■□□□ 1.03
MSH5-215ENST00000482280 RNF19BQ6ZMZ0 732 aa21.5■■□□□ 1.03
MSH5-215ENST00000482280 BRSK2Q8IWQ3 736 aa21.5■■□□□ 1.03
MSH5-215ENST00000482280 PGLYRP2Q96PD5 576 aa21.5■■□□□ 1.03
MSH5-215ENST00000482280 PCIF1Q9H4Z3 704 aa21.5■■□□□ 1.03
MSH5-215ENST00000482280 GDE1Q9NZC3 331 aa21.5■■□□□ 1.03
MSH5-215ENST00000482280 PCDHA7Q9UN72 937 aa21.5■■□□□ 1.03
MSH5-215ENST00000482280 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.49■■□□□ 1.03
MSH5-215ENST00000482280 ANO9A1A5B4 782 aa21.49■■□□□ 1.03
MSH5-215ENST00000482280 CYB561D2O14569 222 aa21.49■■□□□ 1.03
MSH5-215ENST00000482280 PPEF2O14830 753 aa21.49■■□□□ 1.03
MSH5-215ENST00000482280 SEC24AO95486 1093 aa21.49■■□□□ 1.03
MSH5-215ENST00000482280 EPHB3P54753 998 aa21.49■■□□□ 1.03
MSH5-215ENST00000482280 KRT85P78386 507 aa21.49■■□□□ 1.03
MSH5-215ENST00000482280 GPR17Q13304 367 aa21.49■■□□□ 1.03
MSH5-215ENST00000482280 FAM26FQ5R3K3 315 aa21.49■■□□□ 1.03
MSH5-215ENST00000482280 IER5LQ5T953 404 aa21.49■■□□□ 1.03
MSH5-215ENST00000482280 CRELD2Q6UXH1 353 aaPredicted RBP21.49■■□□□ 1.03
MSH5-215ENST00000482280 NPAS3Q8IXF0 933 aa21.49■■□□□ 1.03
MSH5-215ENST00000482280 GPD1LQ8N335 351 aa21.49■■□□□ 1.03
MSH5-215ENST00000482280 TMEM130Q8N3G9 435 aa21.49■■□□□ 1.03
MSH5-215ENST00000482280 AVENQ9NQS1 362 aaPredicted RBP21.49■■□□□ 1.03
MSH5-215ENST00000482280 ASAH2Q9NR71 780 aa21.49■■□□□ 1.03
MSH5-215ENST00000482280 CA14Q9ULX7 337 aa21.49■■□□□ 1.03
MSH5-215ENST00000482280 PDCD11Q14690 1871 aaKnown RBP21.49■■□□□ 1.03
MSH5-215ENST00000482280 GOLGA8IPA6NC78 632 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms