RNA–Protein interactions for RNA: ENST00000481947.1

SNRNP25-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 1,260 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-206ENST00000481947 WDR72Q3MJ13 1102 aa12.78□□□□□ -0.36
SNRNP25-206ENST00000481947 HS1BP3Q53T59 392 aa12.78□□□□□ -0.36
SNRNP25-206ENST00000481947 ZNF667Q5HYK9 610 aa12.78□□□□□ -0.36
SNRNP25-206ENST00000481947 SFMBT2Q5VUG0 894 aa12.78□□□□□ -0.36
SNRNP25-206ENST00000481947 ZNF280BQ86YH2 543 aa12.78□□□□□ -0.36
SNRNP25-206ENST00000481947 RSPH1Q8WYR4 309 aa12.78□□□□□ -0.36
SNRNP25-206ENST00000481947 TOP1MTQ969P6 601 aa12.78□□□□□ -0.36
SNRNP25-206ENST00000481947 ZNF560Q96MR9 790 aa12.78□□□□□ -0.36
SNRNP25-206ENST00000481947 UROC1Q96N76 676 aa12.78□□□□□ -0.36
SNRNP25-206ENST00000481947 ZNF830Q96NB3 372 aaPredicted RBP12.78□□□□□ -0.36
SNRNP25-206ENST00000481947 TBC1D13Q9NVG8 400 aa12.78□□□□□ -0.36
SNRNP25-206ENST00000481947 KANSL3Q9P2N6 904 aa12.78□□□□□ -0.36
SNRNP25-206ENST00000481947 CACNG4Q9UBN1 327 aa12.78□□□□□ -0.36
SNRNP25-206ENST00000481947 R3HCC1Q9Y3T6 440 aaKnown RBP12.78□□□□□ -0.36
SNRNP25-206ENST00000481947 TSC2P49815 1807 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 CASTOR2A6NHX0 329 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 PODXLO00592 558 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 SPTLC1O15269 473 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 FGBP02675 491 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 AMHP03971 560 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 IGFBP6P24592 240 aaPredicted RBP12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 PNPLA4P41247 253 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 STAT1P42224 750 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 TAF6P49848 677 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 CLCNKBP51801 687 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 CDK17Q00537 523 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 UPP1Q16831 310 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 TSR1Q2NL82 804 aaKnown RBP12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 TMEM240Q5SV17 173 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 HGSNATQ68CP4 663 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 SMYD5Q6GMV2 418 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 ZNF365Q70YC5 407 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 IRF2BP2Q7Z5L9 587 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 COLGALT2Q8IYK4 626 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 FAM71AQ8IYT1 594 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 ABI1Q8IZP0 508 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 CCDC112Q8NEF3 446 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 BAG1Q99933 345 aaPredicted RBP12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 PAAF1Q9BRP4 392 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 SDCBP2Q9H190 292 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 GDAP2Q9NXN4 497 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 NXF1Q9UBU9 619 aaKnown RBP12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 ZMYND8Q9ULU4 1186 aaPredicted RBP12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 CNTN6Q9UQ52 1028 aa12.77□□□□□ -0.37
SNRNP25-206ENST00000481947 TBKBP1A7MCY6 615 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 KPNA7A9QM74 516 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 DGKIO75912 1065 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 GFPT2O94808 682 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 CLSTN1O94985 981 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 UPP2O95045 317 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 P4HA1P13674 534 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 PRKCIP41743 596 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 LILRA4P59901 499 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 TNNC1P63316 161 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 ASIC2Q16515 512 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 SV2CQ496J9 727 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 PSRC1Q6PGN9 363 aaPredicted RBP12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 CD300LGQ6UXG3 332 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 SCARA5Q6ZMJ2 495 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 OTOP2Q7RTS6 562 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 LIMS2Q7Z4I7 341 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 GPIHBP1Q8IV16 184 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 FMNL3Q8IVF7 1028 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 TNS4Q8IZW8 715 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 C3orf58Q8NDZ4 430 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 DPF3Q92784 378 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 ZNF689Q96CS4 500 aaPredicted RBP12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 DDX27Q96GQ7 796 aaKnown RBP12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 CHP1Q99653 195 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.76□□□□□ -0.371e-6■■■■□ 21.8
SNRNP25-206ENST00000481947 MRPL9Q9BYD2 267 aaKnown RBP12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 SMYD3Q9H7B4 428 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 CYP3A43Q9HB55 503 aa12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 RC3H2Q9HBD1 1191 aaKnown RBP12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 ZNHIT6Q9NWK9 470 aaKnown RBP12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.76□□□□□ -0.37
SNRNP25-206ENST00000481947 SERPING1P05155 500 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 WEE2P0C1S8 567 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 SKILP12757 684 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 FERP16591 822 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 CLCN1P35523 988 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 RAP1GAPP47736 663 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 KCNJ6P48051 423 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 AARSP49588 968 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 ZNF132P52740 706 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 CDH8P55286 799 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 YWHAEP62258 255 aaKnown RBP12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 RNASELQ05823 741 aaKnown RBP12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 CYP26C1Q6V0L0 522 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 TMTC1Q8IUR5 882 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 HERVK_113Q902F9 699 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 RABGGTAQ92696 567 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 TRIM44Q96DX7 344 aaPredicted RBP12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 KIAA1671Q9BY89 1806 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 FAM124BQ9H5Z6 455 aaPredicted RBP12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 NRDE2Q9H7Z3 1164 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 CISHQ9NSE2 258 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 ARHGAP20Q9P2F6 1191 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 DNAJB4Q9UDY4 337 aa12.75□□□□□ -0.37
SNRNP25-206ENST00000481947 PCDHB4Q9Y5E5 795 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms