RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 FBXL13Q8NEE6 735 aa12.47□□□□□ -0.41
HPS4-212ENST00000481910 TAS1R2Q8TE23 839 aa12.47□□□□□ -0.41
HPS4-212ENST00000481910 DDX27Q96GQ7 796 aaKnown RBP12.47□□□□□ -0.41
HPS4-212ENST00000481910 UROC1Q96N76 676 aa12.47□□□□□ -0.41
HPS4-212ENST00000481910 PAAF1Q9BRP4 392 aa12.47□□□□□ -0.41
HPS4-212ENST00000481910 AGAP1Q9UPQ3 857 aa12.47□□□□□ -0.41
HPS4-212ENST00000481910 UQCRHLA0A096LP55 91 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 P4HA2O15460 535 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 B4GALT3O60512 393 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 UQCRHP07919 91 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 LRPAP1P30533 357 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 POLR2BP30876 1174 aaKnown RBP12.46□□□□□ -0.42
HPS4-212ENST00000481910 PIK3CAP42336 1068 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 RBP5P82980 135 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 MYL7Q01449 175 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 UBXN1Q04323 297 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 NCOA4Q13772 614 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 UPP1Q16831 310 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 FKBP15Q5T1M5 1219 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 C9orf57Q5W0N0 161 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 SMYD5Q6GMV2 418 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 NUCKS1Q9H1E3 243 aaKnown RBP12.46□□□□□ -0.42
HPS4-212ENST00000481910 CWH43Q9H720 699 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 IFNKQ9P0W0 207 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 SIX4Q9UIU6 781 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 FAN1Q9Y2M0 1017 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 MRPL42Q9Y6G3 142 aaKnown RBP12.46□□□□□ -0.42
HPS4-212ENST00000481910 COL4A6Q14031 1691 aa12.46□□□□□ -0.42
HPS4-212ENST00000481910 CCDC189A1A4V9 331 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 ANO9A1A5B4 782 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 LGALS16A8MUM7 142 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 PODXLO00592 558 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 PIRO00625 290 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 PMM2O15305 246 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 B3GAT3O94766 335 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 VNN1O95497 513 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 HLA-DRAP01903 254 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 MYOGP15173 224 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 ZNF280DQ6N043 979 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 DNAJC14Q6Y2X3 702 aaPredicted RBP12.45□□□□□ -0.42
HPS4-212ENST00000481910 CCDC97Q96F63 343 aaPredicted RBP12.45□□□□□ -0.42
HPS4-212ENST00000481910 TMEM175Q9BSA9 504 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 CRACR2AQ9BSW2 395 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 FAM117AQ9C073 453 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 RAB20Q9NX57 234 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 COQ4Q9Y3A0 265 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 TNRC18O15417 2968 aaPredicted RBP12.45□□□□□ -0.42
HPS4-212ENST00000481910 A0A1B0GTH6 734 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 LCHNA4D1U4 455 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 NT5C1B-RDH14C9J2C7 533 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 NRP1O14786 923 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 LRRN2O75325 713 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 GALTP07902 379 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 PBX3P40426 434 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 BCAR1P56945 870 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 MYL6P60660 151 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 MYO1EQ12965 1108 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 NR1I3Q14994 352 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 SGSM1Q2NKQ1 1148 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 DCLRE1AQ6PJP8 1040 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 GBP6Q6ZN66 633 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 SP7Q8TDD2 431 aaPredicted RBP12.45□□□□□ -0.42
HPS4-212ENST00000481910 HPDLQ96IR7 371 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 IMPG2Q9BZV3 1241 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 TRIM5Q9C035 493 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 PRO3102Q9H379 93 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 PRG3Q9Y2Y8 225 aaPredicted RBP12.45□□□□□ -0.42
HPS4-212ENST00000481910 PCDHA11Q9Y5I1 949 aa12.45□□□□□ -0.42
HPS4-212ENST00000481910 SCN1AP35498 2009 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 GBF1Q92538 1859 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 GTPBP10A4D1E9 387 aaKnown RBP12.44□□□□□ -0.42
HPS4-212ENST00000481910 PPEF2O14830 753 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 TEX33O43247 280 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 LAG3P18627 525 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 SLC11A1P49279 550 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 EXOC3L4Q17RC7 722 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 EPC2Q52LR7 807 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 KCNT2Q6UVM3 1135 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 CCDC150Q8NCX0 1101 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 EHBP1Q8NDI1 1231 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 SEMA4DQ92854 862 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 PI4K2AQ9BTU6 479 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 COLEC11Q9BWP8 271 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 XPO4Q9C0E2 1151 aaKnown RBP12.44□□□□□ -0.42
HPS4-212ENST00000481910 AAASQ9NRG9 546 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 GCNT4Q9P109 453 aa12.44□□□□□ -0.42
HPS4-212ENST00000481910 F8W810 466 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 CBFA2T2O43439 604 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 TADA2AO75478 443 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 KIF4AO95239 1232 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 TPM3P06753 285 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 CA3P07451 260 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 IGFBP6P24592 240 aaPredicted RBP12.43□□□□□ -0.42
HPS4-212ENST00000481910 ATICP31939 592 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 PBX2P40425 430 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 PNPLA4P41247 253 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 TAF6P49848 677 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 LILRA4P59901 499 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 WDR72Q3MJ13 1102 aa12.43□□□□□ -0.42
HPS4-212ENST00000481910 WDR44Q5JSH3 913 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms