RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 AFF4Q9UHB7 1163 aaKnown RBP20.16■□□□□ 0.82
CLK1-211ENST00000481641 VPS13AQ96RL7 3174 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 ANK1P16157 1881 aa20.16■□□□□ 0.82
CLK1-211ENST00000481641 DMDP11532 3685 aa20.15■□□□□ 0.82
CLK1-211ENST00000481641 LRRN2O75325 713 aa20.15■□□□□ 0.82
CLK1-211ENST00000481641 OAZ2O95190 189 aa20.15■□□□□ 0.82
CLK1-211ENST00000481641 VNN2O95498 520 aa20.15■□□□□ 0.82
CLK1-211ENST00000481641 SCP2P22307 547 aa20.15■□□□□ 0.82
CLK1-211ENST00000481641 NBL1P41271 181 aa20.15■□□□□ 0.82
CLK1-211ENST00000481641 ADALQ6DHV7 355 aa20.15■□□□□ 0.82
CLK1-211ENST00000481641 TANGO2Q6ICL3 276 aa20.15■□□□□ 0.82
CLK1-211ENST00000481641 PHLDB3Q6NSJ2 640 aa20.15■□□□□ 0.82
CLK1-211ENST00000481641 ASCL5Q7RTU5 278 aa20.15■□□□□ 0.82
CLK1-211ENST00000481641 ZNF720Q7Z2F6 126 aa20.15■□□□□ 0.82
CLK1-211ENST00000481641 PGLYRP2Q96PD5 576 aa20.15■□□□□ 0.82
CLK1-211ENST00000481641 AVENQ9NQS1 362 aaPredicted RBP20.15■□□□□ 0.82
CLK1-211ENST00000481641 STK17AQ9UEE5 414 aa20.15■□□□□ 0.82
CLK1-211ENST00000481641 A0A087X0B3 334 aa20.14■□□□□ 0.81
CLK1-211ENST00000481641 SPTLC1O15269 473 aa20.14■□□□□ 0.81
CLK1-211ENST00000481641 XPOTO43592 962 aaKnown RBP20.14■□□□□ 0.81
CLK1-211ENST00000481641 GJA1P17302 382 aa20.14■□□□□ 0.81
CLK1-211ENST00000481641 KCNA1Q09470 495 aa20.14■□□□□ 0.81
CLK1-211ENST00000481641 BEST2Q8NFU1 509 aa20.14■□□□□ 0.81
CLK1-211ENST00000481641 DNAJC19Q96DA6 116 aa20.14■□□□□ 0.81
CLK1-211ENST00000481641 TMEM209Q96SK2 561 aa20.14■□□□□ 0.81
CLK1-211ENST00000481641 CRISPLD1Q9H336 500 aa20.14■□□□□ 0.81
CLK1-211ENST00000481641 ST6GALNAC4Q9H4F1 302 aa20.14■□□□□ 0.81
CLK1-211ENST00000481641 GDE1Q9NZC3 331 aa20.14■□□□□ 0.81
CLK1-211ENST00000481641 SIT1Q9Y3P8 196 aa20.14■□□□□ 0.81
CLK1-211ENST00000481641 SCN1AP35498 2009 aa20.14■□□□□ 0.81
CLK1-211ENST00000481641 PROB1E7EW31 1015 aa20.13■□□□□ 0.81
CLK1-211ENST00000481641 GLULP15104 373 aa20.13■□□□□ 0.81
CLK1-211ENST00000481641 CDR1P51861 262 aa20.13■□□□□ 0.81
CLK1-211ENST00000481641 STARD6P59095 220 aa20.13■□□□□ 0.81
CLK1-211ENST00000481641 LILRA4P59901 499 aa20.13■□□□□ 0.81
CLK1-211ENST00000481641 TMEM132DQ14C87 1099 aa20.13■□□□□ 0.81
CLK1-211ENST00000481641 SLC44A4Q53GD3 710 aa20.13■□□□□ 0.81
CLK1-211ENST00000481641 C9orf57Q5W0N0 161 aa20.13■□□□□ 0.81
CLK1-211ENST00000481641 PDZD4Q76G19 769 aaPredicted RBP20.13■□□□□ 0.81
CLK1-211ENST00000481641 SV2BQ7L1I2 683 aa20.13■□□□□ 0.81
CLK1-211ENST00000481641 USP37Q86T82 979 aa20.13■□□□□ 0.81
CLK1-211ENST00000481641 INTS4Q96HW7 963 aaKnown RBP20.13■□□□□ 0.81
CLK1-211ENST00000481641 SENP8Q96LD8 212 aa20.13■□□□□ 0.81
CLK1-211ENST00000481641 ZNF512Q96ME7 567 aaPredicted RBP20.13■□□□□ 0.81
CLK1-211ENST00000481641 DLGAP2Q9P1A6 1054 aa20.13■□□□□ 0.81
CLK1-211ENST00000481641 AGO2Q9UKV8 859 aaKnown RBP20.13■□□□□ 0.81
CLK1-211ENST00000481641 YIPF1Q9Y548 306 aa20.13■□□□□ 0.81
CLK1-211ENST00000481641 STYXL1Q9Y6J8 313 aa20.13■□□□□ 0.81
CLK1-211ENST00000481641 PTPRZ1P23471 2315 aaPredicted RBP20.12■□□□□ 0.81
CLK1-211ENST00000481641 K7ELQ4 463 aaPredicted RBP20.12■□□□□ 0.81
CLK1-211ENST00000481641 TULP1O00294 542 aaPredicted RBP20.12■□□□□ 0.81
CLK1-211ENST00000481641 MOSPD3O75425 235 aa20.12■□□□□ 0.81
CLK1-211ENST00000481641 PPP1R37O75864 691 aa20.12■□□□□ 0.81
CLK1-211ENST00000481641 MYL4P12829 197 aa20.12■□□□□ 0.81
CLK1-211ENST00000481641 CD72P21854 359 aa20.12■□□□□ 0.81
CLK1-211ENST00000481641 ADSSP30520 456 aa20.12■□□□□ 0.81
CLK1-211ENST00000481641 TXLNAP40222 546 aa20.12■□□□□ 0.81
CLK1-211ENST00000481641 SLC39A14Q15043 492 aa20.12■□□□□ 0.81
CLK1-211ENST00000481641 MLF2Q15773 248 aaPredicted RBP20.12■□□□□ 0.81
CLK1-211ENST00000481641 FAM78AQ5JUQ0 283 aa20.12■□□□□ 0.81
CLK1-211ENST00000481641 OVOS1Q6IE37 1185 aa20.12■□□□□ 0.81
CLK1-211ENST00000481641 CRELD2Q6UXH1 353 aaPredicted RBP20.12■□□□□ 0.81
CLK1-211ENST00000481641 CD302Q8IX05 232 aa20.12■□□□□ 0.81
CLK1-211ENST00000481641 ELMOD1Q8N336 334 aa20.12■□□□□ 0.81
CLK1-211ENST00000481641 ZSWIM2Q8NEG5 633 aa20.12■□□□□ 0.81
CLK1-211ENST00000481641 ZSWIM3Q96MP5 696 aa20.12■□□□□ 0.81
CLK1-211ENST00000481641 STRA6Q9BX79 667 aa20.12■□□□□ 0.81
CLK1-211ENST00000481641 MRPL44Q9H9J2 332 aaKnown RBP20.12■□□□□ 0.81
CLK1-211ENST00000481641 MTF2Q9Y483 593 aaPredicted RBP20.12■□□□□ 0.81
CLK1-211ENST00000481641 PRR23AA6NEV1 266 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 PIRO00625 290 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 ZNF197O14709 1029 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 STX6O43752 255 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 ECI2O75521 394 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 FCARP24071 287 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 ABCD1P33897 745 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 CASP5P51878 434 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 DUSP4Q13115 394 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 GRM2Q14416 872 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 CYP4A22Q5TCH4 519 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 SLFN12LQ6IEE8 588 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 IQCEQ6IPM2 695 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 PJA1Q8NG27 643 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 POMGNT1Q8WZA1 660 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 TSPAN18Q96SJ8 248 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 FGFBP2Q9BYJ0 223 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 SLC27A5Q9Y2P5 690 aa20.11■□□□□ 0.81
CLK1-211ENST00000481641 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.11■□□□□ 0.81
CLK1-211ENST00000481641 RIF1Q5UIP0 2472 aaKnown RBP20.11■□□□□ 0.81
CLK1-211ENST00000481641 CACNA1IQ9P0X4 2223 aa20.1■□□□□ 0.81
CLK1-211ENST00000481641 CFAP54Q96N23 3096 aa20.1■□□□□ 0.81
CLK1-211ENST00000481641 KANSL1LA0AUZ9 987 aa20.1■□□□□ 0.81
CLK1-211ENST00000481641 ANO9A1A5B4 782 aa20.1■□□□□ 0.81
CLK1-211ENST00000481641 OR6C75A6NL08 312 aa20.1■□□□□ 0.81
CLK1-211ENST00000481641 SOAT2O75908 522 aa20.1■□□□□ 0.81
CLK1-211ENST00000481641 IDEP14735 1019 aa20.1■□□□□ 0.81
CLK1-211ENST00000481641 TYMPP19971 482 aa20.1■□□□□ 0.81
CLK1-211ENST00000481641 STAT6P42226 847 aa20.1■□□□□ 0.81
CLK1-211ENST00000481641 WNT7BP56706 349 aa20.1■□□□□ 0.81
CLK1-211ENST00000481641 GPR17Q13304 367 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms