RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 POMCP01189 267 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 ITGB1P05556 798 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 ALAS1P13196 640 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 LAG3P18627 525 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 VCAM1P19320 739 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 DDCP20711 480 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 FPR1P21462 350 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 CHN2P52757 468 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 MTM1Q13496 603 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 TIGD2Q4W5G0 525 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 KCNV1Q6PIU1 500 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 SYT12Q8IV01 421 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 JDP2Q8WYK2 163 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 HSPBAP1Q96EW2 488 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 NUP88Q99567 741 aaPredicted RBP4.75□□□□□ -1.65
COPA-204ENST00000481522 ZNHIT2Q9UHR6 403 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 FZD1Q9UP38 647 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 ANKRD6Q9Y2G4 727 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 CHST2Q9Y4C5 530 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 USP15Q9Y4E8 981 aaPredicted RBP4.75□□□□□ -1.65
COPA-204ENST00000481522 ACTL7AQ9Y615 435 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 ATRNL1Q5VV63 1379 aa4.75□□□□□ -1.65
COPA-204ENST00000481522 MROH2BQ7Z745 1585 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 NUP160Q12769 1436 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 FAM135BQ49AJ0 1406 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 MAGI3Q5TCQ9 1506 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 GAGE12BA1L429 117 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 GAGE12HA6NDE8 117 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 CCDC154A6NI56 674 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 DRGXA6NNA5 263 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 AHRRA9YTQ3 701 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 HTRA2O43464 458 aaPredicted RBP4.74□□□□□ -1.65
COPA-204ENST00000481522 DTNBO60941 627 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 NCR1O76036 304 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 ABHD16AO95870 558 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 RPLP2P05387 115 aaKnown RBP4.74□□□□□ -1.65
COPA-204ENST00000481522 HLA-DOAP06340 250 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 ZSCAN20P17040 1043 aaPredicted RBP4.74□□□□□ -1.65
COPA-204ENST00000481522 PCSK1P29120 753 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 RAB27AP51159 221 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 CDC42EP1Q00587 391 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 LY6G5CQ5SRR4 150 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 OTUD7BQ6GQQ9 843 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 PPP4R3AQ6IN85 833 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 SYCE2Q6PIF2 218 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 SEM1Q6ZVN7 128 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 MED25Q71SY5 747 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 MRGPREQ86SM8 312 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 PROKR1Q8TCW9 393 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 LENG9Q96B70 501 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 TMX3Q96JJ7 454 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 ZNF768Q9H5H4 540 aaKnown RBP4.74□□□□□ -1.65
COPA-204ENST00000481522 METTL14Q9HCE5 456 aaKnown RBP4.74□□□□□ -1.65
COPA-204ENST00000481522 AKIP1Q9NQ31 210 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 ZIM2Q9NZV7 527 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 TCEAL9Q9UHQ7 104 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 SERPINB13Q9UIV8 391 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 ZNF180Q9UJW8 692 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 LIMCH1Q9UPQ0 1083 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 ATP11BQ9Y2G3 1177 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 THRAP3Q9Y2W1 955 aaKnown RBP4.74□□□□□ -1.65
COPA-204ENST00000481522 IPPQ9Y573 584 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 UNC80Q8N2C7 3258 aa4.74□□□□□ -1.65
COPA-204ENST00000481522 TCOF1Q13428 1488 aaKnown RBP4.74□□□□□ -1.65
COPA-204ENST00000481522 KMT2BQ9UMN6 2715 aaPredicted RBP4.74□□□□□ -1.65
COPA-204ENST00000481522 TRANK1O15050 2925 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 KIAA0391O15091 583 aaKnown RBP4.73□□□□□ -1.65
COPA-204ENST00000481522 SGTAO43765 313 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 PF4V1P10720 104 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 CTGFP29279 349 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 FXR1P51114 621 aaKnown RBP eCLIP4.73□□□□□ -1.659e-9■■■■□ 22.2
COPA-204ENST00000481522 PTPAQ15257 358 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 C3orf36Q3SXR2 165 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 PDCD4Q53EL6 469 aaKnown RBP4.73□□□□□ -1.65
COPA-204ENST00000481522 AGAP9Q5VTM2 703 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 UBE3BQ7Z3V4 1068 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 RHOT2Q8IXI1 618 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 RAB24Q969Q5 203 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 MYEOVQ96EZ4 313 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 CAMKK2Q96RR4 588 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 RHOBTB2Q9BYZ6 727 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 C11orf54Q9H0W9 315 aaPredicted RBP4.73□□□□□ -1.65
COPA-204ENST00000481522 CDH19Q9H159 772 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 PACSIN3Q9UKS6 424 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 EID1Q9Y6B2 187 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 CFTRP13569 1480 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 C3P01024 1663 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 VCANP13611 3396 aa4.73□□□□□ -1.65
COPA-204ENST00000481522 ATP10DQ9P241 1426 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 ARHGEF12Q9NZN5 1544 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 WNT10BO00744 389 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 ZNF185O15231 689 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 AMY1AP04745 511 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 NR4A1P22736 598 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 EDNRBP24530 442 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 AKAP5P24588 427 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 FAM189BP81408 668 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 UBXN2BQ14CS0 331 aa4.72□□□□□ -1.65
COPA-204ENST00000481522 FAM102AQ5T9C2 384 aaPredicted RBP4.72□□□□□ -1.65
COPA-204ENST00000481522 GADL1Q6ZQY3 521 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms