RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 NUDT12Q9BQG2 462 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 RNF208Q9H0X6 261 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 EMILIN3Q9NT22 766 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 PIPSLA2A3N6 862 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 KPNA7A9QM74 516 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 TRIM16O95361 564 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 CTCFP49711 727 aaPredicted RBP12.11□□□□□ -0.47
TRIM27-205ENST00000481474 PDIA6Q15084 440 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 OLFML2AQ68BL7 652 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 NT5DC3Q86UY8 548 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 PACS2Q86VP3 889 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 ZNF555Q8NEP9 628 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 ALDH8A1Q9H2A2 487 aaPredicted RBP12.11□□□□□ -0.47
TRIM27-205ENST00000481474 ABCC11Q96J66 1382 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 GNG14A0A1W2PPG7 69 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 RASGRP1O95267 797 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 URODP06132 367 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 ROR1Q01973 937 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 ORC1Q13415 861 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 SNAPC2Q13487 334 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 DCAF6Q58WW2 860 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 TLK2Q86UE8 772 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 CAPSLQ8WWF8 208 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 MTFMTQ96DP5 389 aaKnown RBP12.11□□□□□ -0.47
TRIM27-205ENST00000481474 MRPL4Q9BYD3 311 aaKnown RBP12.11□□□□□ -0.47
TRIM27-205ENST00000481474 SMARCAL1Q9NZC9 954 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 RHOBTB1O94844 696 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 ENO3P13929 434 aaPredicted RBP12.11□□□□□ -0.47
TRIM27-205ENST00000481474 DMPKQ09013 629 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 GPATCH4Q5T3I0 446 aaKnown RBP12.11□□□□□ -0.47
TRIM27-205ENST00000481474 SYT2Q8N9I0 419 aaPredicted RBP12.11□□□□□ -0.47
TRIM27-205ENST00000481474 TNIP3Q96KP6 325 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 CUEDC2Q9H467 287 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 ARHGEF38Q9NXL2 777 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 CCNB2O95067 398 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 YWHABP31946 246 aaKnown RBP12.11□□□□□ -0.47
TRIM27-205ENST00000481474 ACOT2P49753 483 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 SLC13A5Q86YT5 568 aaPredicted RBP12.11□□□□□ -0.47
TRIM27-205ENST00000481474 SERAC1Q96JX3 654 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 CCDC17Q96LX7 622 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 RUNDC3BQ96NL0 473 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 STK17AQ9UEE5 414 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 CNOT8Q9UFF9 292 aaKnown RBP12.11□□□□□ -0.47
TRIM27-205ENST00000481474 TBKBP1A7MCY6 615 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 AKAP10O43572 662 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 MLPHQ9BV36 600 aaPredicted RBP12.11□□□□□ -0.47
TRIM27-205ENST00000481474 GID8Q9NWU2 228 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 IMPACTQ9P2X3 320 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 FGD5Q6ZNL6 1462 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 MAP3K6O95382 1288 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 NCAM1P13591 858 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 CNTN1Q12860 1018 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 ORC2Q13416 577 aaPredicted RBP12.11□□□□□ -0.47
TRIM27-205ENST00000481474 TRPC4APQ8TEL6 797 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 SLC9A7Q96T83 725 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 SENP7Q9BQF6 1050 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 GPSM3Q9Y4H4 160 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 PCDHB15Q9Y5E8 787 aa12.11□□□□□ -0.47
TRIM27-205ENST00000481474 LRRIQ3A6PVS8 624 aaPredicted RBP12.1□□□□□ -0.47
TRIM27-205ENST00000481474 ZW10O43264 779 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 FGAP02671 866 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 GAP43P17677 238 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 CDK8P49336 464 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 CEBPGP53567 150 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 PTH1RQ03431 593 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 LNX2Q8N448 690 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 TSPAN14Q8NG11 270 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 MRPS31Q92665 395 aaKnown RBP12.1□□□□□ -0.47
TRIM27-205ENST00000481474 ERO1AQ96HE7 468 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 NARS2Q96I59 477 aaKnown RBP12.1□□□□□ -0.47
TRIM27-205ENST00000481474 ELAC2Q9BQ52 826 aaKnown RBP12.1□□□□□ -0.47
TRIM27-205ENST00000481474 ZBTB1Q9Y2K1 713 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 SEMA3EO15041 775 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 TMEM132DQ14C87 1099 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 ZSWIM7Q19AV6 140 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 ZBTB38Q8NAP3 1195 aaPredicted RBP12.1□□□□□ -0.47
TRIM27-205ENST00000481474 GIMAP8Q8ND71 665 aaPredicted RBP12.1□□□□□ -0.47
TRIM27-205ENST00000481474 PMEPA1Q969W9 287 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 FAM118BQ9BPY3 351 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 UNKQ9C0B0 810 aaKnown RBP12.1□□□□□ -0.47
TRIM27-205ENST00000481474 STARD7Q9NQZ5 370 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 MARCOQ9UEW3 520 aaPredicted RBP12.1□□□□□ -0.47
TRIM27-205ENST00000481474 PCDHA4Q9UN74 947 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.1□□□□□ -0.47
TRIM27-205ENST00000481474 SCAMP1O15126 338 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 CCNT2O60583 730 aaKnown RBP12.1□□□□□ -0.47
TRIM27-205ENST00000481474 HSMCR30P0CW71 290 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 STK4Q13043 487 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 ZNF177Q13360 481 aaPredicted RBP12.1□□□□□ -0.47
TRIM27-205ENST00000481474 TYW3Q6IPR3 259 aaKnown RBP12.1□□□□□ -0.47
TRIM27-205ENST00000481474 CES5AQ6NT32 575 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 NEK10Q6ZWH5 1172 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 BBS7Q8IWZ6 715 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 GALNT4Q8N4A0 578 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 GGA3Q9NZ52 723 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 CHKBQ9Y259 395 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 UHRF1BP1Q6BDS2 1440 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 TBC1D3BA6NDS4 549 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 PMPCBO75439 489 aa12.1□□□□□ -0.47
TRIM27-205ENST00000481474 CASP9P55211 416 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms