RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 WDR6Q9NNW5 1121 aaKnown RBP21.8■■□□□ 1.08
VPS36-204ENST00000480923 AGPAT3Q9NRZ7 376 aa21.8■■□□□ 1.08
VPS36-204ENST00000480923 HSPBP1Q9NZL4 362 aa21.8■■□□□ 1.08
VPS36-204ENST00000480923 USTQ9Y2C2 406 aa21.8■■□□□ 1.08
VPS36-204ENST00000480923 CLUHO75153 1309 aa21.8■■□□□ 1.08
VPS36-204ENST00000480923 ANO9A1A5B4 782 aa21.79■■□□□ 1.08
VPS36-204ENST00000480923 TBC1D4O60343 1298 aa21.79■■□□□ 1.08
VPS36-204ENST00000480923 HNRNPA1P09651 372 aaKnown RBP eCLIP21.79■■□□□ 1.08
VPS36-204ENST00000480923 PAX3P23760 479 aa21.79■■□□□ 1.08
VPS36-204ENST00000480923 ELF1P32519 619 aa21.79■■□□□ 1.08
VPS36-204ENST00000480923 KMT5BQ4FZB7 885 aa21.79■■□□□ 1.08
VPS36-204ENST00000480923 HS2ST1Q7LGA3 356 aa21.79■■□□□ 1.08
VPS36-204ENST00000480923 PLCD3Q8N3E9 789 aa21.79■■□□□ 1.08
VPS36-204ENST00000480923 CACTINQ8WUQ7 758 aaKnown RBP21.79■■□□□ 1.08
VPS36-204ENST00000480923 SENP8Q96LD8 212 aa21.79■■□□□ 1.08
VPS36-204ENST00000480923 PDE11AQ9HCR9 933 aa21.79■■□□□ 1.08
VPS36-204ENST00000480923 POLIQ9UNA4 740 aa21.79■■□□□ 1.08
VPS36-204ENST00000480923 WDR27A2RRH5 827 aa21.78■■□□□ 1.08
VPS36-204ENST00000480923 GOLGA6L4A6NEF3 574 aa21.78■■□□□ 1.08
VPS36-204ENST00000480923 ZNF233A6NK53 670 aa21.78■■□□□ 1.08
VPS36-204ENST00000480923 CLIC2O15247 247 aa21.78■■□□□ 1.08
VPS36-204ENST00000480923 SPTLC1O15269 473 aa21.78■■□□□ 1.08
VPS36-204ENST00000480923 CCL16O15467 120 aa21.78■■□□□ 1.08
VPS36-204ENST00000480923 TGFB1I1O43294 461 aa21.78■■□□□ 1.08
VPS36-204ENST00000480923 XYLBO75191 536 aa21.78■■□□□ 1.08
VPS36-204ENST00000480923 PAPLNO95428 1278 aa21.78■■□□□ 1.08
VPS36-204ENST00000480923 MYL1P05976 194 aa21.78■■□□□ 1.08
VPS36-204ENST00000480923 ODC1P11926 461 aa21.78■■□□□ 1.08
VPS36-204ENST00000480923 UVSSAQ2YD98 709 aa21.78■■□□□ 1.08
VPS36-204ENST00000480923 KRBA2Q6ZNG9 492 aa21.78■■□□□ 1.08
VPS36-204ENST00000480923 ZDHHC14Q8IZN3 488 aa21.78■■□□□ 1.08
VPS36-204ENST00000480923 ZNF461Q8TAF7 563 aa21.78■■□□□ 1.08
VPS36-204ENST00000480923 ARHGEF37A1IGU5 675 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 PRRG1O14668 218 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 OAZ2O95190 189 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 RPN1P04843 607 aaKnown RBP21.77■■□□□ 1.08
VPS36-204ENST00000480923 CPB1P15086 417 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 TYMPP19971 482 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 HOXA9P31269 272 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 GBP2P32456 591 aaPredicted RBP21.77■■□□□ 1.08
VPS36-204ENST00000480923 TAF6P49848 677 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 CYP2J2P51589 502 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 STK4Q13043 487 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 PSMD2Q13200 908 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 BMT2Q1RMZ1 405 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 CBWD2Q8IUF1 395 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 CCDC47Q96A33 483 aaKnown RBP21.77■■□□□ 1.08
VPS36-204ENST00000480923 ZNF560Q96MR9 790 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 KIAA1586Q9HCI6 787 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 C11orf16Q9NQ32 467 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 LIMD1Q9UGP4 676 aa21.77■■□□□ 1.08
VPS36-204ENST00000480923 GPR37L1O60883 481 aa21.76■■□□□ 1.07
VPS36-204ENST00000480923 ABLIM3O94929 683 aa21.76■■□□□ 1.07
VPS36-204ENST00000480923 ZNF202O95125 648 aa21.76■■□□□ 1.07
VPS36-204ENST00000480923 TMEM191BP0C7N4 346 aa21.76■■□□□ 1.07
VPS36-204ENST00000480923 PRR29P0C7W0 189 aa21.76■■□□□ 1.07
VPS36-204ENST00000480923 ATF2P15336 505 aa21.76■■□□□ 1.07
VPS36-204ENST00000480923 SNRPFP62306 86 aaKnown RBP21.76■■□□□ 1.07
VPS36-204ENST00000480923 PTPN21Q16825 1174 aa21.76■■□□□ 1.07
VPS36-204ENST00000480923 KNOP1Q1ED39 458 aaKnown RBP21.76■■□□□ 1.07
VPS36-204ENST00000480923 TPGS2Q68CL5 300 aa21.76■■□□□ 1.07
VPS36-204ENST00000480923 OVOS1Q6IE37 1185 aa21.76■■□□□ 1.07
VPS36-204ENST00000480923 GRASPQ7Z6J2 395 aaPredicted RBP21.76■■□□□ 1.07
VPS36-204ENST00000480923 RDH13Q8NBN7 331 aa21.76■■□□□ 1.07
VPS36-204ENST00000480923 EDAQ92838 391 aa21.76■■□□□ 1.07
VPS36-204ENST00000480923 FAM84AQ96KN4 292 aa21.76■■□□□ 1.07
VPS36-204ENST00000480923 LRFN3Q9BTN0 628 aa21.76■■□□□ 1.07
VPS36-204ENST00000480923 OXCT2Q9BYC2 517 aaPredicted RBP21.76■■□□□ 1.07
VPS36-204ENST00000480923 CYP4F11Q9HBI6 524 aa21.76■■□□□ 1.07
VPS36-204ENST00000480923 AGAP1Q9UPQ3 857 aa21.76■■□□□ 1.07
VPS36-204ENST00000480923 OR6C75A6NL08 312 aa21.75■■□□□ 1.07
VPS36-204ENST00000480923 CYB561D2O14569 222 aa21.75■■□□□ 1.07
VPS36-204ENST00000480923 ITGB3P05106 788 aa21.75■■□□□ 1.07
VPS36-204ENST00000480923 POLR2BP30876 1174 aaKnown RBP21.75■■□□□ 1.07
VPS36-204ENST00000480923 ZXDAP98168 799 aa21.75■■□□□ 1.07
VPS36-204ENST00000480923 SURF1Q15526 300 aa21.75■■□□□ 1.07
VPS36-204ENST00000480923 SV2CQ496J9 727 aa21.75■■□□□ 1.07
VPS36-204ENST00000480923 LMBRD2Q68DH5 695 aaPredicted RBP21.75■■□□□ 1.07
VPS36-204ENST00000480923 RTL10Q7L3V2 364 aa21.75■■□□□ 1.07
VPS36-204ENST00000480923 GET4Q7L5D6 327 aaPredicted RBP21.75■■□□□ 1.07
VPS36-204ENST00000480923 C1orf127Q8N9H9 656 aa21.75■■□□□ 1.07
VPS36-204ENST00000480923 KIAA0895Q8NCT3 520 aa21.75■■□□□ 1.07
VPS36-204ENST00000480923 CCDC34Q96HJ3 373 aa21.75■■□□□ 1.07
VPS36-204ENST00000480923 ANKRD36BP1Q96IX9 119 aa21.75■■□□□ 1.07
VPS36-204ENST00000480923 CGNQ9P2M7 1197 aaKnown RBP21.75■■□□□ 1.07
VPS36-204ENST00000480923 DSEQ9UL01 958 aa21.75■■□□□ 1.07
VPS36-204ENST00000480923 LRG1P02750 347 aa21.74■■□□□ 1.07
VPS36-204ENST00000480923 ASGR2P07307 311 aa21.74■■□□□ 1.07
VPS36-204ENST00000480923 KRT19P08727 400 aa21.74■■□□□ 1.07
VPS36-204ENST00000480923 OR4Q2P0C623 313 aa21.74■■□□□ 1.07
VPS36-204ENST00000480923 FSHRP23945 695 aa21.74■■□□□ 1.07
VPS36-204ENST00000480923 PNPLA4P41247 253 aa21.74■■□□□ 1.07
VPS36-204ENST00000480923 NTHL1P78549 312 aa21.74■■□□□ 1.07
VPS36-204ENST00000480923 SNRNP35Q16560 246 aaKnown RBP21.74■■□□□ 1.07
VPS36-204ENST00000480923 RNF19BQ6ZMZ0 732 aa21.74■■□□□ 1.07
VPS36-204ENST00000480923 METTL23Q86XA0 190 aa21.74■■□□□ 1.07
VPS36-204ENST00000480923 TCEAL8Q8IYN2 117 aa21.74■■□□□ 1.07
VPS36-204ENST00000480923 CSGALNACT2Q8N6G5 542 aa21.74■■□□□ 1.07
VPS36-204ENST00000480923 XXYLT1Q8NBI6 393 aa21.74■■□□□ 1.07
VPS36-204ENST00000480923 MTMR12Q9C0I1 747 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms