RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 MAGEA9P43362 315 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 ALDH1A3P47895 512 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 TAF6P49848 677 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 LILRA4P59901 499 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 PRKCQQ04759 706 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 SURF1Q15526 300 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 OVOS1Q6IE37 1185 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 PHLDB3Q6NSJ2 640 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 C1orf228Q6PIY5 440 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 DYMQ7RTS9 669 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 ITIH5Q86UX2 942 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 SIX5Q8N196 739 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 THEM5Q8N1Q8 247 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 SLC44A3Q8N4M1 653 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 SPATA18Q8TC71 538 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 FAM212AQ96EL1 285 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 BORCS6Q96GS4 357 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 ZNF512Q96ME7 567 aaPredicted RBP12.4□□□□□ -0.42
CCM2-213ENST00000480658 ASAH2Q9NR71 780 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 ARHGEF3Q9NR81 526 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 PANK4Q9NVE7 773 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 FAM13BQ9NYF5 915 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 ATP6V1DQ9Y5K8 247 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 NUMBLQ9Y6R0 609 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 TECTAO75443 2155 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 VWA8A3KMH1 1905 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 EIF3DO15371 548 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCM2-213ENST00000480658 ADAM12O43184 909 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 ECI2O75521 394 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 CYP11A1P05108 521 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 RHOP08100 348 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 ZSCAN22P10073 491 aaPredicted RBP12.39□□□□□ -0.43
CCM2-213ENST00000480658 TNFSF9P41273 254 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 TUFMP49411 452 aaKnown RBP12.39□□□□□ -0.43
CCM2-213ENST00000480658 EPHB3P54753 998 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 ARPP19P56211 112 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 ADCY1Q08828 1119 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 GPR17Q13304 367 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 SEZ6Q53EL9 994 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 SPECC1Q5M775 1068 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 C9orf57Q5W0N0 161 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 JADE1Q6IE81 842 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 CNNM4Q6P4Q7 775 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 FLCNQ8NFG4 579 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 DNAJC19Q96DA6 116 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 CLIC6Q96NY7 704 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 STRA6Q9BX79 667 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 CGNQ9P2M7 1197 aaKnown RBP12.39□□□□□ -0.43
CCM2-213ENST00000480658 ITGA11Q9UKX5 1188 aa12.39□□□□□ -0.43
CCM2-213ENST00000480658 ANO9A1A5B4 782 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 MYMKA6NI61 221 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 STK25O00506 426 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 PIRO00625 290 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 NCAM2O15394 837 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 EXTL3O43909 919 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 MYL1P05976 194 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 ACOT2P49753 483 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 VCPP55072 806 aaKnown RBP12.38□□□□□ -0.43
CCM2-213ENST00000480658 VEPH1Q14D04 833 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 ZC2HC1CQ53FD0 456 aaPredicted RBP12.38□□□□□ -0.43
CCM2-213ENST00000480658 SLC39A4Q6P5W5 647 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 BRSK2Q8IWQ3 736 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 NPAS3Q8IXF0 933 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 PRSS33Q8NF86 280 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 LRRC15Q8TF66 581 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 DNASE1L2Q92874 299 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 ELSPBP1Q96BH3 223 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 MSANTD3Q96H12 275 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 CCDC34Q96HJ3 373 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 HAPLN2Q9GZV7 340 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 KBTBD4Q9NVX7 518 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 DPP3Q9NY33 737 aa12.38□□□□□ -0.43
CCM2-213ENST00000480658 RBAKQ9NYW8 714 aaPredicted RBP12.38□□□□□ -0.43
CCM2-213ENST00000480658 DNMT3BQ9UBC3 853 aaKnown RBP12.38□□□□□ -0.43
CCM2-213ENST00000480658 MRPS17Q9Y2R5 130 aaKnown RBP12.38□□□□□ -0.43
CCM2-213ENST00000480658 MYH15Q9Y2K3 1946 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 MEFVO15553 781 aaPredicted RBP12.37□□□□□ -0.43
CCM2-213ENST00000480658 PRPF40AO75400 957 aaKnown RBP12.37□□□□□ -0.43
CCM2-213ENST00000480658 F13A1P00488 732 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 CFHP08603 1231 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 NFICP08651 508 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 MYBP10242 640 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 ME1P48163 572 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 EPHA5P54756 1037 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 TCF15Q12870 199 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 MYO1EQ12965 1108 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 ZC3H14Q6PJT7 736 aaKnown RBP12.37□□□□□ -0.43
CCM2-213ENST00000480658 USP49Q70CQ1 688 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 CCDC105Q8IYK2 499 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 CEP57L1Q8IYX8 460 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 DCP1BQ8IZD4 617 aaKnown RBP12.37□□□□□ -0.43
CCM2-213ENST00000480658 TMEM86AQ8N2M4 240 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 LRRC52Q8N7C0 313 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 GOLGA5Q8TBA6 731 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 SPPL2BQ8TCT7 592 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 DEPDC1BQ8WUY9 529 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 ATOH1Q92858 354 aaPredicted RBP12.37□□□□□ -0.43
CCM2-213ENST00000480658 SENP8Q96LD8 212 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 GCNAQ96QF7 691 aa12.37□□□□□ -0.43
CCM2-213ENST00000480658 NELL2Q99435 816 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms