RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 PPM1JQ5JR12 505 aa11.34□□□□□ -0.59
SMURF1-204ENST00000480055 ATF7IP2Q5U623 682 aa11.34□□□□□ -0.59
SMURF1-204ENST00000480055 EEF1DP3Q658K8 133 aa11.34□□□□□ -0.59
SMURF1-204ENST00000480055 ANKS3Q6ZW76 656 aa11.34□□□□□ -0.59
SMURF1-204ENST00000480055 RTL10Q7L3V2 364 aa11.34□□□□□ -0.59
SMURF1-204ENST00000480055 UROC1Q96N76 676 aa11.34□□□□□ -0.59
SMURF1-204ENST00000480055 CORO1BQ9BR76 489 aa11.34□□□□□ -0.59
SMURF1-204ENST00000480055 KIFC3Q9BVG8 833 aa11.34□□□□□ -0.59
SMURF1-204ENST00000480055 POLD4Q9HCU8 107 aa11.34□□□□□ -0.59
SMURF1-204ENST00000480055 AVENQ9NQS1 362 aaPredicted RBP11.34□□□□□ -0.59
SMURF1-204ENST00000480055 GDE1Q9NZC3 331 aa11.34□□□□□ -0.59
SMURF1-204ENST00000480055 RAB23Q9ULC3 237 aa11.34□□□□□ -0.59
SMURF1-204ENST00000480055 NDRG2Q9UN36 371 aaKnown RBP11.34□□□□□ -0.59
SMURF1-204ENST00000480055 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.34□□□□□ -0.59
SMURF1-204ENST00000480055 KIAA1549LQ6ZVL6 1849 aa11.34□□□□□ -0.59
SMURF1-204ENST00000480055 MYH11P35749 1972 aa11.34□□□□□ -0.59
SMURF1-204ENST00000480055 ANK1P16157 1881 aa11.34□□□□□ -0.59
SMURF1-204ENST00000480055 CYP11B2P19099 503 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 FCARP24071 287 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 IGFBP6P24592 240 aaPredicted RBP11.33□□□□□ -0.6
SMURF1-204ENST00000480055 GGCXP38435 758 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 BRCC3P46736 316 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 RBM25P49756 843 aaKnown RBP11.33□□□□□ -0.6
SMURF1-204ENST00000480055 EFNA5P52803 228 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 OSTNP61366 133 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 GRM2Q14416 872 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 PPP2R5DQ14738 602 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 UPP1Q16831 310 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 TANGO2Q6ICL3 276 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 ELMOD1Q8N336 334 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 CELF5Q8N6W0 485 aaKnown RBP11.33□□□□□ -0.6
SMURF1-204ENST00000480055 ELSPBP1Q96BH3 223 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 THAP11Q96EK4 314 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 USB1Q9BQ65 265 aaKnown RBP11.33□□□□□ -0.6
SMURF1-204ENST00000480055 POLR3CQ9BUI4 534 aaPredicted RBP11.33□□□□□ -0.6
SMURF1-204ENST00000480055 CCDC113Q9H0I3 377 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 TMEM60Q9H2L4 133 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 BRD9Q9H8M2 597 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 CYP4F11Q9HBI6 524 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 GOLGA2P5Q9HBQ8 144 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 BACE2Q9Y5Z0 518 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 ZNF638Q14966 1978 aaKnown RBP11.33□□□□□ -0.6
SMURF1-204ENST00000480055 MYO16Q9Y6X6 1858 aa11.33□□□□□ -0.6
SMURF1-204ENST00000480055 NUP205Q92621 2012 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 SMIM28A0A1B0GU29 152 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 CCDC169A6NNP5 214 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 TMEM189-UBE2V1I3L0A0 370 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 K7ERI5 159 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 MAN2B1O00754 1011 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 EDN1P05305 212 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 RETP07949 1114 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 CEBPBP17676 345 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 CCT6AP40227 531 aaKnown RBP11.32□□□□□ -0.6
SMURF1-204ENST00000480055 GUCY1B3Q02153 619 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 GNL2Q13823 731 aaKnown RBP11.32□□□□□ -0.6
SMURF1-204ENST00000480055 ZNF174Q15697 407 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 LPAL2Q16609 132 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 ME3Q16798 604 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 PRSS36Q5K4E3 855 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 CYP4A22Q5TCH4 519 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 NT5DC1Q5TFE4 455 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 PDZD4Q76G19 769 aaPredicted RBP11.32□□□□□ -0.6
SMURF1-204ENST00000480055 NSUN7Q8NE18 718 aaKnown RBP11.32□□□□□ -0.6
SMURF1-204ENST00000480055 ZNF461Q8TAF7 563 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 GTF3C6Q969F1 213 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 PPP1R10Q96QC0 940 aaKnown RBP11.32□□□□□ -0.6
SMURF1-204ENST00000480055 TCHPQ9BT92 498 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 TRMT61BQ9BVS5 477 aaKnown RBP11.32□□□□□ -0.6
SMURF1-204ENST00000480055 CCDC94Q9BW85 323 aaPredicted RBP11.32□□□□□ -0.6
SMURF1-204ENST00000480055 SLC6A16Q9GZN6 736 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 ZFP14Q9HCL3 533 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 TOPORSQ9NS56 1045 aaPredicted RBP11.32□□□□□ -0.6
SMURF1-204ENST00000480055 SLC38A7Q9NVC3 462 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 NUB1Q9Y5A7 615 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 SDK1Q7Z5N4 2213 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 OBSL1O75147 1896 aa11.32□□□□□ -0.6
SMURF1-204ENST00000480055 ATG2BQ96BY7 2078 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.31□□□□□ -0.6
SMURF1-204ENST00000480055 ARHGEF37A1IGU5 675 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 H7C4K7 107 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 PODXLO00592 558 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 ZNF197O14709 1029 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 JAK2O60674 1132 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 LARGE1O95461 756 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 OR52Z1P0C646 297 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 RPA1P27694 616 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 CCR3P51677 355 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 ROR1Q01973 937 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 ZNF568Q3ZCX4 644 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 HAUS3Q68CZ6 603 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 IQCEQ6IPM2 695 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 PRR23CQ6ZRP0 262 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 RETREG3Q86VR2 466 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 C3orf58Q8NDZ4 430 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 KIFAP3Q92845 792 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 ZNF512Q96ME7 567 aaPredicted RBP11.31□□□□□ -0.6
SMURF1-204ENST00000480055 BHMT2Q9H2M3 363 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 TRPV5Q9NQA5 729 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 SEMA4GQ9NTN9 838 aa11.31□□□□□ -0.6
SMURF1-204ENST00000480055 CEP295Q9C0D2 2601 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms