RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 M0QZQ0 153 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 TULP1O00294 542 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 NRP1O14786 923 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 SPTLC1O15269 473 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 LRRN2O75325 713 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 NOL4O94818 638 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 ALDH2P05091 517 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 FAM163BP0C2L3 166 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 P4HA1P13674 534 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 TBXAS1P24557 533 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 ASPAP45381 313 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 OR1G1P47890 313 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 BCAR1P56945 870 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 TRIM14Q14142 442 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 RAB30Q15771 203 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 KLHDC7AQ5VTJ3 777 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 FAM109BQ6ICB4 259 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 KCNT2Q6UVM3 1135 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 DPH6Q7L8W6 267 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 RNF168Q8IYW5 571 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 SLC39A11Q8N1S5 342 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 COLGALT1Q8NBJ5 622 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 SPATA18Q8TC71 538 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 JAKMIP2Q96AA8 810 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 SUSD3Q96L08 255 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 PI4K2AQ9BTU6 479 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 COLEC11Q9BWP8 271 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 LSM14BQ9BX40 385 aaKnown RBP13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 AAASQ9NRG9 546 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 CACNG4Q9UBN1 327 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 ADAM28Q9UKQ2 775 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 FAN1Q9Y2M0 1017 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 NUB1Q9Y5A7 615 aa13.47□□□□□ -0.25
TRAPPC12-218ENST00000479897 PLXNA4Q9HCM2 1894 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 A0A1W2PQJ5 194 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 ARHGEF37A1IGU5 675 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 LCHNA4D1U4 455 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 LINC01553A4QN01 128 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 B3GAT3O94766 335 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 ADCY5O95622 1261 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 UCHL3P15374 230 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 ALDH7A1P49419 539 aaKnown RBP13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 KLK7P49862 253 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 ELAVL2Q12926 359 aaKnown RBP13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 WDR72Q3MJ13 1102 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 SPECC1LQ69YQ0 1117 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 SPOPLQ6IQ16 392 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 PHLDB3Q6NSJ2 640 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 ENOSF1Q7L5Y1 443 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 TOP6BLQ8N6T0 577 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 UBR7Q8N806 425 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 NEK11Q8NG66 645 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 IGSF21Q96ID5 467 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 SAMD11Q96NU1 681 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 NUP58Q9BVL2 599 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 PLVAPQ9BX97 442 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 NAA15Q9BXJ9 866 aaKnown RBP13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 EDEM3Q9BZQ6 932 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 CYP3A43Q9HB55 503 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 CEP72Q9P209 647 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 STK39Q9UEW8 545 aa13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 PRG3Q9Y2Y8 225 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC12-218ENST00000479897 RANBP2P49792 3224 aaKnown RBP13.46□□□□□ -0.26
TRAPPC12-218ENST00000479897 SF3B1O75533 1304 aaKnown RBP eCLIP13.45□□□□□ -0.266e-6■■■■■ 46
TRAPPC12-218ENST00000479897 C5orf67F2Z3F1 127 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 SYN3O14994 580 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 EPHB6O15197 1021 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 TRAPPC3O43617 180 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 TACC1O75410 805 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 CYP11A1P05108 521 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 ITGB1P05556 798 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 TRIM21P19474 475 aaKnown RBP13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 TYMPP19971 482 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 TNNC1P63316 161 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 INCA1Q0VD86 236 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 CUL2Q13617 745 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 TIGD5Q53EQ6 642 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 FUT10Q6P4F1 479 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 CHRDL2Q6WN34 429 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 TMEM173Q86WV6 379 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 ARHGEF19Q8IW93 802 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 TMEM86AQ8N2M4 240 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 PPM1KQ8N3J5 372 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 TTC39CQ8N584 583 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 BCL7CQ8WUZ0 217 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 TATDN2Q93075 761 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 SENP8Q96LD8 212 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 PBX4Q9BYU1 374 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 FAM207AQ9NSI2 230 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 MYO6Q9UM54 1294 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 PCDHB12Q9Y5F1 795 aa13.45□□□□□ -0.26
TRAPPC12-218ENST00000479897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.45□□□□□ -0.261e-7■□□□□ 10
TRAPPC12-218ENST00000479897 GRXCR1A8MXD5 290 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 F8W810 466 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 HUS1O60921 280 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 ODC1P11926 461 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 IGFBP6P24592 240 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 RABGGTBP53611 331 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 MFAP3P55082 362 aa13.44□□□□□ -0.26
TRAPPC12-218ENST00000479897 YWHAEP62258 255 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms