RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 TNNC1P63316 161 aa15.21■□□□□ 0.03
RPP40-205ENST00000479782 SCARA3Q6AZY7 606 aa15.21■□□□□ 0.03
RPP40-205ENST00000479782 PSRC1Q6PGN9 363 aaPredicted RBP15.21■□□□□ 0.03
RPP40-205ENST00000479782 WDR59Q6PJI9 974 aa15.21■□□□□ 0.03
RPP40-205ENST00000479782 CYP26C1Q6V0L0 522 aa15.21■□□□□ 0.03
RPP40-205ENST00000479782 TMTC1Q8IUR5 882 aa15.21■□□□□ 0.03
RPP40-205ENST00000479782 CASD1Q96PB1 797 aa15.21■□□□□ 0.03
RPP40-205ENST00000479782 BCO2Q9BYV7 579 aa15.21■□□□□ 0.03
RPP40-205ENST00000479782 GPR88Q9GZN0 384 aa15.21■□□□□ 0.03
RPP40-205ENST00000479782 GOLGA2P5Q9HBQ8 144 aa15.21■□□□□ 0.03
RPP40-205ENST00000479782 TBC1D13Q9NVG8 400 aa15.21■□□□□ 0.03
RPP40-205ENST00000479782 BZW2Q9Y6E2 419 aaKnown RBP15.21■□□□□ 0.03
RPP40-205ENST00000479782 FOXN3O00409 490 aaPredicted RBP15.2■□□□□ 0.02
RPP40-205ENST00000479782 PODXLO00592 558 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 FGBP02675 491 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 ACRP10323 421 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 KCNJ6P48051 423 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 WDR5P61964 334 aaKnown RBP15.2■□□□□ 0.02
RPP40-205ENST00000479782 CCZ1BP86790 482 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 CCZ1P86791 482 aaPredicted RBP15.2■□□□□ 0.02
RPP40-205ENST00000479782 RNASELQ05823 741 aaKnown RBP15.2■□□□□ 0.02
RPP40-205ENST00000479782 DSC1Q08554 894 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 ASIC2Q16515 512 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 UPP1Q16831 310 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.2■□□□□ 0.02
RPP40-205ENST00000479782 TMEM139Q8IV31 216 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 FAM71AQ8IYT1 594 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 TMEM130Q8N3G9 435 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 TTC39CQ8N584 583 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 KAT5Q92993 513 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 TOP1MTQ969P6 601 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 ELMO3Q96BJ8 720 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 KCNF1Q9H3M0 494 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 CYP3A43Q9HB55 503 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 GDAP2Q9NXN4 497 aa15.2■□□□□ 0.02
RPP40-205ENST00000479782 NXF1Q9UBU9 619 aaKnown RBP15.2■□□□□ 0.02
RPP40-205ENST00000479782 FNDC1Q4ZHG4 1894 aaPredicted RBP15.19■□□□□ 0.02
RPP40-205ENST00000479782 KPNA7A9QM74 516 aa15.19■□□□□ 0.02
RPP40-205ENST00000479782 PPEF2O14830 753 aa15.19■□□□□ 0.02
RPP40-205ENST00000479782 ARHGAP6O43182 974 aa15.19■□□□□ 0.02
RPP40-205ENST00000479782 SERPING1P05155 500 aa15.19■□□□□ 0.02
RPP40-205ENST00000479782 SKILP12757 684 aa15.19■□□□□ 0.02
RPP40-205ENST00000479782 PRKCIP41743 596 aa15.19■□□□□ 0.02
RPP40-205ENST00000479782 CLCNKBP51801 687 aa15.19■□□□□ 0.02
RPP40-205ENST00000479782 LILRA4P59901 499 aa15.19■□□□□ 0.02
RPP40-205ENST00000479782 LRRC43Q8N309 656 aa15.19■□□□□ 0.02
RPP40-205ENST00000479782 UBR7Q8N806 425 aa15.19■□□□□ 0.02
RPP40-205ENST00000479782 FAM193BQ96PV7 902 aaPredicted RBP15.19■□□□□ 0.02
RPP40-205ENST00000479782 ARID3AQ99856 593 aa15.19■□□□□ 0.02
RPP40-205ENST00000479782 CNTN6Q9UQ52 1028 aa15.19■□□□□ 0.02
RPP40-205ENST00000479782 SSU72P8A0A1W2PR75 194 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 CASTOR2A6NHX0 329 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 DGKIO75912 1065 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 GFPT2O94808 682 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 ACO1P21399 889 aaKnown RBP15.18■□□□□ 0.02
RPP40-205ENST00000479782 BPIFB4P59827 614 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 KLHL30Q0D2K2 578 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 E4F1Q66K89 784 aaPredicted RBP15.18■□□□□ 0.02
RPP40-205ENST00000479782 HGSNATQ68CP4 663 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 DCLRE1AQ6PJP8 1040 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 SCARA5Q6ZMJ2 495 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 ZNF365Q70YC5 407 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 C16orf59Q7L2K0 433 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 DPH6Q7L8W6 267 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 IRF2BP2Q7Z5L9 587 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 COLGALT2Q8IYK4 626 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 DPF3Q92784 378 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 MMS19Q96T76 1030 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 LBHD1Q9BQE6 289 aaPredicted RBP15.18■□□□□ 0.02
RPP40-205ENST00000479782 POLIQ9UNA4 740 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 SNX9Q9Y5X1 595 aa15.18■□□□□ 0.02
RPP40-205ENST00000479782 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.18■□□□□ 0.02
RPP40-205ENST00000479782 SCN1AP35498 2009 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 TBKBP1A7MCY6 615 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 TMEM189-UBE2V1I3L0A0 370 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 DDHD2O94830 711 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 UPP2O95045 317 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 FAM163BP0C2L3 166 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 PNMA6AP0CW24 399 aaPredicted RBP15.17■□□□□ 0.02
RPP40-205ENST00000479782 KRT5P13647 590 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 SYN1P17600 705 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 ANXA13P27216 316 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 USP8P40818 1118 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 DEFB103AP81534 67 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 ARID5AQ03989 594 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 TDRD12Q587J7 1177 aaKnown RBP15.17■□□□□ 0.02
RPP40-205ENST00000479782 TMEM240Q5SV17 173 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 OTOP2Q7RTS6 562 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 LIMS2Q7Z4I7 341 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 ZNF280BQ86YH2 543 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 CCDC170Q8IYT3 715 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 TNS4Q8IZW8 715 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 TOP6BLQ8N6T0 577 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 APPL2Q8NEU8 664 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 ZNF689Q96CS4 500 aaPredicted RBP15.17■□□□□ 0.02
RPP40-205ENST00000479782 ZNF830Q96NB3 372 aaPredicted RBP15.17■□□□□ 0.02
RPP40-205ENST00000479782 TMEM175Q9BSA9 504 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 CISHQ9NSE2 258 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 ARHGAP20Q9P2F6 1191 aa15.17■□□□□ 0.02
RPP40-205ENST00000479782 PCDHB4Q9Y5E5 795 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms