RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 TTC9BQ8N6N2 239 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 PDILTQ8N807 584 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 KRI1Q8N9T8 703 aaKnown RBP18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 DTWD2Q8NBA8 298 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 NOC3LQ8WTT2 800 aaKnown RBP18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 CEP72Q9P209 647 aa18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 SRPRBQ9Y5M8 271 aaKnown RBP18.89■□□□□ 0.61
ECHDC1-216ENST00000479525 ARHGEF37A1IGU5 675 aa18.88■□□□□ 0.61
ECHDC1-216ENST00000479525 SLC26A4O43511 780 aa18.88■□□□□ 0.61
ECHDC1-216ENST00000479525 MYL4P12829 197 aa18.88■□□□□ 0.61
ECHDC1-216ENST00000479525 PTPN2P17706 415 aa18.88■□□□□ 0.61
ECHDC1-216ENST00000479525 PDCP20941 246 aa18.88■□□□□ 0.61
ECHDC1-216ENST00000479525 YWHAHQ04917 246 aaPredicted RBP18.88■□□□□ 0.61
ECHDC1-216ENST00000479525 GRM2Q14416 872 aa18.88■□□□□ 0.61
ECHDC1-216ENST00000479525 ANGPT1Q15389 498 aa18.88■□□□□ 0.61
ECHDC1-216ENST00000479525 SCARA3Q6AZY7 606 aa18.88■□□□□ 0.61
ECHDC1-216ENST00000479525 TANGO2Q6ICL3 276 aa18.88■□□□□ 0.61
ECHDC1-216ENST00000479525 APPL2Q8NEU8 664 aa18.88■□□□□ 0.61
ECHDC1-216ENST00000479525 NXPE3Q969Y0 559 aa18.88■□□□□ 0.61
ECHDC1-216ENST00000479525 PLEKHA5Q9HAU0 1116 aa18.88■□□□□ 0.61
ECHDC1-216ENST00000479525 KCNG1Q9UIX4 513 aa18.88■□□□□ 0.61
ECHDC1-216ENST00000479525 SLC27A5Q9Y2P5 690 aa18.88■□□□□ 0.61
ECHDC1-216ENST00000479525 CFAP54Q96N23 3096 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 NCANO14594 1321 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 K7ELQ4 463 aaPredicted RBP18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 M0QZQ0 153 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 IDEP14735 1019 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 GLULP15104 373 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 PRSS36Q5K4E3 855 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 SPATA1Q5VX52 437 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 EFCAB13Q8IY85 973 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 TCEAL8Q8IYN2 117 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 DNAJC19Q96DA6 116 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 SAAL1Q96ER3 474 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 ZSWIM3Q96MP5 696 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 RTP3Q9BQQ7 232 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 MRPL44Q9H9J2 332 aaKnown RBP18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 TFIP11Q9UBB9 837 aaKnown RBP18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 CCDC39Q9UFE4 941 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 AGO2Q9UKV8 859 aaKnown RBP18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 MTF2Q9Y483 593 aaPredicted RBP18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 YIPF1Q9Y548 306 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 COL4A2P08572 1712 aa18.87■□□□□ 0.61
ECHDC1-216ENST00000479525 STX6O43752 255 aa18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 GCNT3O95395 438 aa18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 TMEM132DQ14C87 1099 aa18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 C9orf57Q5W0N0 161 aa18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 CRELD2Q6UXH1 353 aaPredicted RBP18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 MTSS1LQ765P7 747 aa18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 ZNF720Q7Z2F6 126 aa18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 USP37Q86T82 979 aa18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 SPRYD3Q8NCJ5 442 aa18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 BEST2Q8NFU1 509 aa18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 POMGNT1Q8WZA1 660 aa18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 HPS3Q969F9 1004 aa18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 SENP8Q96LD8 212 aa18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 SLC2A4RGQ9NR83 387 aa18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 AFF4Q9UHB7 1163 aaKnown RBP18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 CACNA1IQ9P0X4 2223 aa18.86■□□□□ 0.61
ECHDC1-216ENST00000479525 ZFHX2Q9C0A1 2572 aaPredicted RBP18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 GOLGA8IPA6NC78 632 aa18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 GOLGA8JA6NMD2 632 aa18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 MOSPD3O75425 235 aa18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 POU2F2P09086 479 aa18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 ADSSP30520 456 aa18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 STAT6P42226 847 aa18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 AARSP49588 968 aaKnown RBP eCLIP18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 LILRA4P59901 499 aa18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 DUSP4Q13115 394 aa18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 OVOS1Q6IE37 1185 aa18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 PDZD4Q76G19 769 aaPredicted RBP18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 SV2BQ7L1I2 683 aa18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 ATAD1Q8NBU5 361 aa18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 GLIS3Q8NEA6 775 aa18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 STK17AQ9UEE5 414 aa18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 ZFP37Q9Y6Q3 630 aaPredicted RBP18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 R4GN57 208 aa18.85■□□□□ 0.61
ECHDC1-216ENST00000479525 ZNF638Q14966 1978 aaKnown RBP18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 PPP1R37O75864 691 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 CYP3A5P20815 502 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 FCARP24071 287 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 TXLNAP40222 546 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 UBXN2BQ14CS0 331 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 STK38Q15208 465 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 TEAD2Q15562 447 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 MLF2Q15773 248 aaPredicted RBP18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 FAM78AQ5JUQ0 283 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 STXBP5Q5T5C0 1151 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 TPGS2Q68CL5 300 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 OR10T2Q8NGX3 314 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 DNAJC25Q9H1X3 360 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 PCIF1Q9H4Z3 704 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 KCNH3Q9ULD8 1083 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 SIT1Q9Y3P8 196 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 OBSL1O75147 1896 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 DENND4CQ5VZ89 1909 aa18.84■□□□□ 0.61
ECHDC1-216ENST00000479525 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 MTMR11A4FU01 709 aa18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 XPOTO43592 962 aaKnown RBP18.83■□□□□ 0.61
ECHDC1-216ENST00000479525 PRPF6O94906 941 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms