RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 IQCA1LA6NCM1 817 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 OGTO15294 1046 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 GAS2O43903 313 aaKnown RBP15.11■□□□□ 0.01
COL20A1-206ENST00000479501 PSMD10O75832 226 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 DRP2Q13474 957 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 BIRC2Q13490 618 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 LRRC37BQ96QE4 947 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 KLHL8Q9P2G9 620 aaPredicted RBP15.11■□□□□ 0.01
COL20A1-206ENST00000479501 PARP4Q9UKK3 1724 aaKnown RBP15.11■□□□□ 0.01
COL20A1-206ENST00000479501 H3BQF6 201 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 PIK3CDO00329 1044 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 IL18RAPO95256 599 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 NPY5RQ15761 445 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 KYNUQ16719 465 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 HEATR6Q6AI08 1181 aaKnown RBP15.11■□□□□ 0.01
COL20A1-206ENST00000479501 C1orf228Q6PIY5 440 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 OR6J1Q8NGC5 347 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 PRPF31Q8WWY3 499 aaKnown RBP15.11■□□□□ 0.01
COL20A1-206ENST00000479501 YY1AP1Q9H869 796 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 TMEM150BA6NC51 233 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 DDX3XO00571 662 aaKnown RBP eCLIP15.1■□□□□ 0.01
COL20A1-206ENST00000479501 RALAP11233 206 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 SOX10P56693 466 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 CYP24A1Q07973 514 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 SLC29A2Q14542 456 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 C2CD6Q53TS8 623 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 TMEM139Q8IV31 216 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 LRRC43Q8N309 656 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 TGS1Q96RS0 853 aaKnown RBP15.1■□□□□ 0.01
COL20A1-206ENST00000479501 CCDC68Q9H2F9 335 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 ATP8B3O60423 1300 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 PIK3R2O00459 728 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 LONRF1Q17RB8 773 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 CREG2Q8IUH2 290 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 ZNF473Q8WTR7 871 aaKnown RBP15.1■□□□□ 0.01
COL20A1-206ENST00000479501 ZNF560Q96MR9 790 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 TRIM55Q9BYV6 548 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 XAB2Q9HCS7 855 aaKnown RBP15.1■□□□□ 0.01
COL20A1-206ENST00000479501 IPO11Q9UI26 975 aaKnown RBP15.1■□□□□ 0.01
COL20A1-206ENST00000479501 RNF225M0QZC1 329 aaPredicted RBP15.1■□□□□ 0.01
COL20A1-206ENST00000479501 DYNC1LI2O43237 492 aaPredicted RBP15.1■□□□□ 0.01
COL20A1-206ENST00000479501 HSPA9P38646 679 aaKnown RBP15.1■□□□□ 0.01
COL20A1-206ENST00000479501 FNTAP49354 379 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 STILQ15468 1287 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 ATG16L1Q676U5 607 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 SLC47A2Q86VL8 602 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 SLC12A6Q9UHW9 1150 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 RGPD1P0DJD0 1748 aa15.1■□□□□ 0.01
COL20A1-206ENST00000479501 BRD2P25440 801 aaKnown RBP15.09■□□□□ 0.01
COL20A1-206ENST00000479501 RGS7P49802 495 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 KCNMA1Q12791 1236 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 COBLL1Q53SF7 1204 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 TATDN1Q6P1N9 297 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 PDZD8Q8NEN9 1154 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 MAML1Q92585 1016 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 VPS33BQ9H267 617 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 EPS15L1Q9UBC2 864 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 DSG3P32926 999 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 TMPRSS15P98073 1019 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 ETNPPLQ8TBG4 499 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 HDAC7Q8WUI4 952 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 OSBPL1AQ9BXW6 950 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 NEU2Q9Y3R4 380 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 DISP2A7MBM2 1401 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 CREB3O43889 395 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 KRT80Q6KB66 452 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 RWDD4Q6NW29 188 aaKnown RBP15.09■□□□□ 0.01
COL20A1-206ENST00000479501 BTNL9Q6UXG8 535 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 DHX38Q92620 1227 aaKnown RBP15.09■□□□□ 0.01
COL20A1-206ENST00000479501 ARL8AQ96BM9 186 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 TNIP3Q96KP6 325 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 PIN4Q9Y237 131 aaKnown RBP15.09■□□□□ 0.01
COL20A1-206ENST00000479501 INPP5FQ9Y2H2 1132 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 CHN1P15882 459 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 RRM1P23921 792 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 SEC24CP53992 1094 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 PHEXP78562 749 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 BBS5Q8N3I7 341 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 C1orf131Q8NDD1 294 aaKnown RBP15.09■□□□□ 0.01
COL20A1-206ENST00000479501 CXorf38Q8TB03 319 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 SENP1Q9P0U3 644 aa15.09■□□□□ 0.01
COL20A1-206ENST00000479501 PPP1R11O60927 126 aaPredicted RBP15.08■□□□□ 0.01
COL20A1-206ENST00000479501 SASH3O75995 380 aa15.08■□□□□ 0.01
COL20A1-206ENST00000479501 ANKMY2Q8IV38 441 aa15.08■□□□□ 0.01
COL20A1-206ENST00000479501 HIPK4Q8NE63 616 aa15.08■□□□□ 0.01
COL20A1-206ENST00000479501 ATP8B4Q8TF62 1192 aa15.08■□□□□ 0.01
COL20A1-206ENST00000479501 WDR18Q9BV38 432 aa15.08■□□□□ 0.01
COL20A1-206ENST00000479501 FOXP3Q9BZS1 431 aa15.08■□□□□ 0.01
COL20A1-206ENST00000479501 PABPC3Q9H361 631 aaKnown RBP15.08■□□□□ 0.01
COL20A1-206ENST00000479501 FGFR1OP2Q9NVK5 253 aa15.08■□□□□ 0.01
COL20A1-206ENST00000479501 RCCD1A6NED2 376 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 SPAG7O75391 227 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 GSTA1P08263 222 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 GSTA2P09210 222 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 ITGA8P53708 1063 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 RAD23BP54727 409 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 ARPP19P56211 112 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 CDC42EP1Q00587 391 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 CENPCQ03188 943 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 ZBTB17Q13105 803 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms