RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 RHOT2Q8IXI1 618 aa5.57□□□□□ -1.52
SSR1-207ENST00000479485 CELF5Q8N6W0 485 aaKnown RBP5.57□□□□□ -1.52
SSR1-207ENST00000479485 BRIX1Q8TDN6 353 aaKnown RBP5.57□□□□□ -1.52
SSR1-207ENST00000479485 SH3RF3Q8TEJ3 882 aaPredicted RBP5.57□□□□□ -1.52
SSR1-207ENST00000479485 FRAT1Q92837 279 aaPredicted RBP5.57□□□□□ -1.52
SSR1-207ENST00000479485 TNPO1Q92973 898 aaKnown RBP5.57□□□□□ -1.52
SSR1-207ENST00000479485 NT5C1BQ96P26 610 aa5.57□□□□□ -1.52
SSR1-207ENST00000479485 TEX101Q9BY14 249 aa5.57□□□□□ -1.52
SSR1-207ENST00000479485 REXO4Q9GZR2 422 aaKnown RBP5.57□□□□□ -1.52
SSR1-207ENST00000479485 MRPL46Q9H2W6 279 aaKnown RBP5.57□□□□□ -1.52
SSR1-207ENST00000479485 FAM204AQ9H8W3 233 aa5.57□□□□□ -1.52
SSR1-207ENST00000479485 GNL3LQ9NVN8 582 aaKnown RBP5.57□□□□□ -1.52
SSR1-207ENST00000479485 LAS1LQ9Y4W2 734 aaKnown RBP5.57□□□□□ -1.52
SSR1-207ENST00000479485 EIF4G1Q04637 1599 aaKnown RBP5.57□□□□□ -1.52
SSR1-207ENST00000479485 AHRRA9YTQ3 701 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 RECQL4O94761 1208 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 MATN4O95460 622 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 C1SP09871 688 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 FCER1AP12319 257 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 GCSHP23434 173 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 GDF5P43026 501 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 PHKA1P46020 1223 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 AGFG1P52594 562 aaKnown RBP5.56□□□□□ -1.52
SSR1-207ENST00000479485 PSMC1P62191 440 aaKnown RBP5.56□□□□□ -1.52
SSR1-207ENST00000479485 NOMO3P69849 1222 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 ANO6Q4KMQ2 910 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 PDCD4Q53EL6 469 aaKnown RBP5.56□□□□□ -1.52
SSR1-207ENST00000479485 NOMO2Q5JPE7 1267 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 TSHZ3Q63HK5 1081 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 SWSAP1Q6NVH7 229 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 CCDC149Q6ZUS6 474 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 TMIEQ8NEW7 156 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 OR56A1Q8NGH5 318 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 DCLRE1CQ96SD1 692 aaKnown RBP5.56□□□□□ -1.52
SSR1-207ENST00000479485 ZSWIM1Q9BR11 485 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 TMEM60Q9H2L4 133 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 ZNF768Q9H5H4 540 aaKnown RBP5.56□□□□□ -1.52
SSR1-207ENST00000479485 PARPBPQ9NWS1 579 aa5.56□□□□□ -1.52
SSR1-207ENST00000479485 PEG3Q9GZU2 1588 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 RNF123Q5XPI4 1314 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 A0A088AWK7 358 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 A0A0U1RQG5 324 aaPredicted RBP5.55□□□□□ -1.52
SSR1-207ENST00000479485 CAPN8A6NHC0 703 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 ZNF785A8K8V0 405 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 DIRC3C9JPN6 131 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 TPP1O14773 563 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 PLSCR1O15162 318 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 RPS6KA4O75676 772 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 GJB1P08034 283 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 SPATA31D3P0C874 917 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 USP14P54578 494 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 TBX4P57082 545 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 IRX6P78412 446 aaPredicted RBP5.55□□□□□ -1.52
SSR1-207ENST00000479485 FAM189BP81408 668 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 EXOSC9Q06265 439 aaKnown RBP5.55□□□□□ -1.52
SSR1-207ENST00000479485 SLFN5Q08AF3 891 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 FGL2Q14314 439 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 TAF3Q5VWG9 929 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 SPATA31D4Q6ZUB0 917 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 SPRED1Q7Z699 444 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 KIAA0319LQ8IZA0 1049 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 NUP133Q8WUM0 1156 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 KLHL32Q96NJ5 620 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 PLEKHG4BQ96PX9 1271 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 TLR10Q9BXR5 811 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 BRD9Q9H8M2 597 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 ZMAT3Q9HA38 289 aaKnown RBP5.55□□□□□ -1.52
SSR1-207ENST00000479485 SARS2Q9NP81 518 aaKnown RBP5.55□□□□□ -1.52
SSR1-207ENST00000479485 KLHL11Q9NVR0 708 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 RLIMQ9NVW2 624 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 CFAP97Q9P2B7 532 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 USP25Q9UHP3 1055 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 CPA4Q9UI42 421 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 PCDHA6Q9UN73 950 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 AATKQ6ZMQ8 1374 aa5.55□□□□□ -1.52
SSR1-207ENST00000479485 CCDC78A2IDD5 438 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 C1QTNF3-AMACRE9PGA6 284 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 KIF3BO15066 747 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 NCR1O76036 304 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 RARBP10826 455 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 CKBP12277 381 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 FGFR4P22455 802 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 ACVRL1P37023 503 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 GNALP38405 381 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 SOX8P57073 446 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 SLC25A3Q00325 362 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 OCA2Q04671 838 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 CNN3Q15417 329 aaKnown RBP5.54□□□□□ -1.52
SSR1-207ENST00000479485 KHDC1LQ5JSQ8 128 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 PPP4R4Q6NUP7 873 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 MAEAQ7L5Y9 396 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 CHST15Q7LFX5 561 aaPredicted RBP5.54□□□□□ -1.52
SSR1-207ENST00000479485 SMAP1Q8IYB5 467 aaPredicted RBP5.54□□□□□ -1.52
SSR1-207ENST00000479485 AOPEPQ8N6M6 819 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 FAM156AQ8NDB6 213 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 CACTINQ8WUQ7 758 aaKnown RBP5.54□□□□□ -1.52
SSR1-207ENST00000479485 ANP32BQ92688 251 aaKnown RBP5.54□□□□□ -1.52
SSR1-207ENST00000479485 TRIM44Q96DX7 344 aaPredicted RBP5.54□□□□□ -1.52
SSR1-207ENST00000479485 SLC46A2Q9BY10 475 aa5.54□□□□□ -1.52
SSR1-207ENST00000479485 RNPEPQ9H4A4 650 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms