RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 SLC16A3O15427 465 aaKnown RBP28.91■■■□□ 2.22
CCM2-211ENST00000478582 TNNC2P02585 160 aa28.91■■■□□ 2.22
CCM2-211ENST00000478582 BRCC3P46736 316 aa28.91■■■□□ 2.22
CCM2-211ENST00000478582 AP3M2P53677 418 aa28.91■■■□□ 2.22
CCM2-211ENST00000478582 KCNC3Q14003 757 aa28.91■■■□□ 2.22
CCM2-211ENST00000478582 CT47A1Q5JQC4 288 aaPredicted RBP28.91■■■□□ 2.22
CCM2-211ENST00000478582 LMBRD2Q68DH5 695 aaPredicted RBP28.91■■■□□ 2.22
CCM2-211ENST00000478582 TMEM184AQ6ZMB5 413 aa28.91■■■□□ 2.22
CCM2-211ENST00000478582 USP37Q86T82 979 aa28.91■■■□□ 2.22
CCM2-211ENST00000478582 VN1R2Q8NFZ6 395 aa28.91■■■□□ 2.22
CCM2-211ENST00000478582 ZNF516Q92618 1163 aa28.91■■■□□ 2.22
CCM2-211ENST00000478582 SYAP1Q96A49 352 aaPredicted RBP28.91■■■□□ 2.22
CCM2-211ENST00000478582 BORCS6Q96GS4 357 aa28.91■■■□□ 2.22
CCM2-211ENST00000478582 SUSD3Q96L08 255 aa28.91■■■□□ 2.22
CCM2-211ENST00000478582 BARX2Q9UMQ3 279 aaPredicted RBP28.91■■■□□ 2.22
CCM2-211ENST00000478582 LRRIQ3A6PVS8 624 aaPredicted RBP28.9■■■□□ 2.22
CCM2-211ENST00000478582 TULP1O00294 542 aaPredicted RBP28.9■■■□□ 2.22
CCM2-211ENST00000478582 IKBKBO14920 756 aa28.9■■■□□ 2.22
CCM2-211ENST00000478582 EPB41P11171 864 aaKnown RBP28.9■■■□□ 2.22
CCM2-211ENST00000478582 FGFR3P22607 806 aa28.9■■■□□ 2.22
CCM2-211ENST00000478582 GLUD2P49448 558 aa28.9■■■□□ 2.22
CCM2-211ENST00000478582 LILRA4P59901 499 aa28.9■■■□□ 2.22
CCM2-211ENST00000478582 PTPN14Q15678 1187 aa28.9■■■□□ 2.22
CCM2-211ENST00000478582 SMAD2Q15796 467 aaKnown RBP28.9■■■□□ 2.22
CCM2-211ENST00000478582 DPCR1Q3MIW9 517 aa28.9■■■□□ 2.22
CCM2-211ENST00000478582 FAM171A1Q5VUB5 890 aa28.9■■■□□ 2.22
CCM2-211ENST00000478582 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.9■■■□□ 2.22
CCM2-211ENST00000478582 FILIP1Q7Z7B0 1213 aa28.9■■■□□ 2.22
CCM2-211ENST00000478582 MRPL17Q9NRX2 175 aaKnown RBP28.9■■■□□ 2.22
CCM2-211ENST00000478582 PRKAG3Q9UGI9 489 aa28.9■■■□□ 2.22
CCM2-211ENST00000478582 DACH1Q9UI36 760 aa28.9■■■□□ 2.22
CCM2-211ENST00000478582 ITGB3P05106 788 aa28.89■■■□□ 2.22
CCM2-211ENST00000478582 URODP06132 367 aa28.89■■■□□ 2.22
CCM2-211ENST00000478582 KRT13P13646 458 aa28.89■■■□□ 2.22
CCM2-211ENST00000478582 VAMP7P51809 220 aa28.89■■■□□ 2.22
CCM2-211ENST00000478582 STX17P56962 302 aa28.89■■■□□ 2.22
CCM2-211ENST00000478582 RBP5P82980 135 aa28.89■■■□□ 2.22
CCM2-211ENST00000478582 RBM10P98175 930 aaKnown RBP28.89■■■□□ 2.22
CCM2-211ENST00000478582 BFSP1Q12934 665 aa28.89■■■□□ 2.22
CCM2-211ENST00000478582 CAVIN1Q6NZI2 390 aaKnown RBP28.89■■■□□ 2.22
CCM2-211ENST00000478582 TRAPPC11Q7Z392 1133 aa28.89■■■□□ 2.22
CCM2-211ENST00000478582 CSGALNACT2Q8N6G5 542 aa28.89■■■□□ 2.22
CCM2-211ENST00000478582 LRRC52Q8N7C0 313 aa28.89■■■□□ 2.22
CCM2-211ENST00000478582 SMRP1Q8NCR6 262 aa28.89■■■□□ 2.22
CCM2-211ENST00000478582 EEF2KMTQ96G04 330 aa28.89■■■□□ 2.22
CCM2-211ENST00000478582 TTPALQ9BTX7 342 aa28.89■■■□□ 2.22
CCM2-211ENST00000478582 CD320Q9NPF0 282 aa28.89■■■□□ 2.22
CCM2-211ENST00000478582 SIX4Q9UIU6 781 aa28.89■■■□□ 2.22
CCM2-211ENST00000478582 M0QZQ0 153 aa28.88■■■□□ 2.21
CCM2-211ENST00000478582 SYN3O14994 580 aa28.88■■■□□ 2.21
CCM2-211ENST00000478582 SRGAP2BP0DMP2 458 aa28.88■■■□□ 2.21
CCM2-211ENST00000478582 ERCC5P28715 1186 aaPredicted RBP28.88■■■□□ 2.21
CCM2-211ENST00000478582 POLR2BP30876 1174 aaKnown RBP28.88■■■□□ 2.21
CCM2-211ENST00000478582 PNPLA4P41247 253 aa28.88■■■□□ 2.21
CCM2-211ENST00000478582 DLG4P78352 724 aa28.88■■■□□ 2.21
CCM2-211ENST00000478582 C1orf220Q5T0J3 134 aa28.88■■■□□ 2.21
CCM2-211ENST00000478582 KIAA1841Q6NSI8 718 aa28.88■■■□□ 2.21
CCM2-211ENST00000478582 GJD3Q8N144 294 aa28.88■■■□□ 2.21
CCM2-211ENST00000478582 AUTS2Q8WXX7 1259 aa28.88■■■□□ 2.21
CCM2-211ENST00000478582 FAM84AQ96KN4 292 aa28.88■■■□□ 2.21
CCM2-211ENST00000478582 MED15Q96RN5 788 aa28.88■■■□□ 2.21
CCM2-211ENST00000478582 AGAP1Q9UPQ3 857 aa28.88■■■□□ 2.21
CCM2-211ENST00000478582 MUC3AQ02505 3323 aa28.87■■■□□ 2.21
CCM2-211ENST00000478582 CA8P35219 290 aa28.87■■■□□ 2.21
CCM2-211ENST00000478582 TAF6P49848 677 aa28.87■■■□□ 2.21
CCM2-211ENST00000478582 SKOR2Q2VWA4 1001 aaPredicted RBP28.87■■■□□ 2.21
CCM2-211ENST00000478582 RTP2Q5QGT7 225 aa28.87■■■□□ 2.21
CCM2-211ENST00000478582 SASS6Q6UVJ0 657 aa28.87■■■□□ 2.21
CCM2-211ENST00000478582 PIK3R5Q8WYR1 880 aa28.87■■■□□ 2.21
CCM2-211ENST00000478582 B3GALT6Q96L58 329 aa28.87■■■□□ 2.21
CCM2-211ENST00000478582 ZNF560Q96MR9 790 aa28.87■■■□□ 2.21
CCM2-211ENST00000478582 RXFP1Q9HBX9 757 aa28.87■■■□□ 2.21
CCM2-211ENST00000478582 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.86■■■□□ 2.21
CCM2-211ENST00000478582 I3L4J1 428 aa28.86■■■□□ 2.21
CCM2-211ENST00000478582 SPTLC1O15269 473 aa28.86■■■□□ 2.21
CCM2-211ENST00000478582 CLASP2O75122 1294 aaKnown RBP28.86■■■□□ 2.21
CCM2-211ENST00000478582 C4BPAP04003 597 aaKnown RBP28.86■■■□□ 2.21
CCM2-211ENST00000478582 PDXDC1Q6P996 788 aa28.86■■■□□ 2.21
CCM2-211ENST00000478582 RIN2Q8WYP3 895 aaPredicted RBP28.86■■■□□ 2.21
CCM2-211ENST00000478582 METTL14Q9HCE5 456 aaKnown RBP28.86■■■□□ 2.21
CCM2-211ENST00000478582 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.86■■■□□ 2.21
CCM2-211ENST00000478582 PCDHB8Q9UN66 801 aa28.86■■■□□ 2.21
CCM2-211ENST00000478582 FGFR1OPO95684 399 aaKnown RBP28.85■■■□□ 2.21
CCM2-211ENST00000478582 TKTP29401 623 aaKnown RBP28.85■■■□□ 2.21
CCM2-211ENST00000478582 CREMQ03060 361 aa28.85■■■□□ 2.21
CCM2-211ENST00000478582 SV2CQ496J9 727 aa28.85■■■□□ 2.21
CCM2-211ENST00000478582 SCARA3Q6AZY7 606 aa28.85■■■□□ 2.21
CCM2-211ENST00000478582 ANKRD54Q6NXT1 300 aa28.85■■■□□ 2.21
CCM2-211ENST00000478582 LLGL2Q6P1M3 1020 aa28.85■■■□□ 2.21
CCM2-211ENST00000478582 FRMD5Q7Z6J6 570 aa28.85■■■□□ 2.21
CCM2-211ENST00000478582 CEP57Q86XR8 500 aa28.85■■■□□ 2.21
CCM2-211ENST00000478582 ADHFE1Q8IWW8 467 aa28.85■■■□□ 2.21
CCM2-211ENST00000478582 LNX1Q8TBB1 728 aaPredicted RBP28.85■■■□□ 2.21
CCM2-211ENST00000478582 FNIP2Q9P278 1114 aa28.85■■■□□ 2.21
CCM2-211ENST00000478582 HCFC2Q9Y5Z7 792 aa28.85■■■□□ 2.21
CCM2-211ENST00000478582 BDP1A6H8Y1 2624 aa28.85■■■□□ 2.21
CCM2-211ENST00000478582 KRT19P08727 400 aa28.84■■■□□ 2.21
CCM2-211ENST00000478582 SSTR3P32745 418 aaPredicted RBP28.84■■■□□ 2.21
CCM2-211ENST00000478582 ZP2Q05996 745 aa28.84■■■□□ 2.21
CCM2-211ENST00000478582 DSTYKQ6XUX3 929 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms