RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 SLC52A1Q9NWF4 448 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 TUBD1Q9UJT1 453 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 PNPLA7Q6ZV29 1317 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 AATKQ6ZMQ8 1374 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 A0A1B0GTW7 788 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 WNT10BO00744 389 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 ERC2O15083 957 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 NDUFS2O75306 463 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 ALOX15P16050 662 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 ATP5JP18859 108 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 MPLP40238 635 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 HSD11B2P80365 405 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 HNRNPA0Q13151 305 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 B3GNTL1Q67FW5 361 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 Q6ZVL8 140 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 ARHGEF25Q86VW2 580 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 DGKHQ86XP1 1220 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 CCDC146Q8IYE0 955 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 NELL1Q92832 810 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 DUSP26Q9BV47 211 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 SLC12A5Q9H2X9 1139 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 RNPEPQ9H4A4 650 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 DMRT3Q9NQL9 472 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 ANLNQ9NQW6 1124 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 ZBTB21Q9ULJ3 1066 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 MAST3O60307 1309 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 SALL3Q9BXA9 1300 aa5.19□□□□□ -1.58
CDC42BPA-212ENST00000478573 POMCP01189 267 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 HSPA6P17066 643 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 FGFR4P22455 802 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 SREBF1P36956 1147 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 WASP42768 502 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 ELLP55199 621 aaPredicted RBP5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 CXADRP78310 365 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 SCAPQ12770 1279 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 SP140Q13342 867 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 GBX1Q14549 363 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 ADRM1Q16186 407 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 COLEC12Q5KU26 742 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 B3GNT9Q6UX72 402 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 CCAR1Q8IX12 1150 aaKnown RBP5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 MIER2Q8N344 545 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 SLC9A6Q92581 669 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 FATE1Q969F0 183 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 ACE2Q9BYF1 805 aaPredicted RBP5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 NMRK2Q9NPI5 230 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 PRDM11Q9NQV5 511 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 LANCL2Q9NS86 450 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 TBCCD1Q9NVR7 557 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 OBP2AQ9NY56 170 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 MOCS1Q9NZB8 636 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 LRIT1Q9P2V4 623 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 USP25Q9UHP3 1055 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 SCOCQ9UIL1 159 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 MTO1Q9Y2Z2 717 aaKnown RBP5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 FGD5Q6ZNL6 1462 aa5.18□□□□□ -1.58
CDC42BPA-212ENST00000478573 VSTM5A8MXK1 200 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 ERN1O75460 977 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 GPANK1O95872 356 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 C1RP00736 705 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 POU2F2P09086 479 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 IL2RBP14784 551 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 SLC6A2P23975 617 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 ALDH1A3P47895 512 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 MALLQ13021 153 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 NOMO1Q15155 1222 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 ATAT1Q5SQI0 421 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 ZNF529Q6P280 563 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 FOXR2Q6PJQ5 311 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 Q6ZNX1 250 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 COA7Q96BR5 231 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 RUNDC1Q96C34 613 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 SLC2A13Q96QE2 648 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 LRFN3Q9BTN0 628 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 GREM2Q9H772 168 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 ARNT2Q9HBZ2 717 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 GALNT9Q9HCQ5 603 aa5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 AJAP1Q9UKB5 411 aaPredicted RBP5.17□□□□□ -1.58
CDC42BPA-212ENST00000478573 ATRNL1Q5VV63 1379 aa5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 SYNJ1O43426 1573 aa5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 CCDC78A2IDD5 438 aa5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 OFD1O75665 1012 aa5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 MAP4K4O95819 1239 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 KRT18P05783 430 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 CDK4P11802 303 aa5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 FPR1P21462 350 aa5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 SLC16A1P53985 500 aa5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 KIF23Q02241 960 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 ZNF169Q14929 603 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 MUM1L1Q5H9M0 696 aa5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 IFIT1BQ5T764 474 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 UBE3BQ7Z3V4 1068 aa5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 SLC35G2Q8TBE7 412 aa5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 TAAR9Q96RI9 348 aa5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 ADI1Q9BV57 179 aa5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 RBM12Q9NTZ6 932 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 SERPINB13Q9UIV8 391 aa5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 RUVBL1Q9Y265 456 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-212ENST00000478573 SIK3Q9Y2K2 1263 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms