RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 TMEM175Q9BSA9 504 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 SLC28A3Q9HAS3 691 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 METTL14Q9HCE5 456 aaKnown RBP12.37□□□□□ -0.43
CBWD3-206ENST00000478048 MARCH5Q9NX47 278 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 SIX4Q9UIU6 781 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 FAN1Q9Y2M0 1017 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 PODXLO00592 558 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 XPOTO43592 962 aaKnown RBP12.37□□□□□ -0.43
CBWD3-206ENST00000478048 KIF4AO95239 1232 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 GNA14O95837 355 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 CST3P01034 146 aaPredicted RBP12.37□□□□□ -0.43
CBWD3-206ENST00000478048 C4BPAP04003 597 aaKnown RBP12.37□□□□□ -0.43
CBWD3-206ENST00000478048 ITGB3P05106 788 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 LAG3P18627 525 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 LRPAP1P30533 357 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 CTNNB1P35222 781 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 BMPR1AP36894 532 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 ALDH7A1P49419 539 aaKnown RBP12.37□□□□□ -0.43
CBWD3-206ENST00000478048 ERVK-21P61565 698 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 EPC2Q52LR7 807 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 CDKAL1Q5VV42 579 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 TDRD10Q5VZ19 366 aaKnown RBP12.37□□□□□ -0.43
CBWD3-206ENST00000478048 C9orf57Q5W0N0 161 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 SV2AQ7L0J3 742 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 TRAPPC11Q7Z392 1133 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 SLC39A11Q8N1S5 342 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 CACTINQ8WUQ7 758 aaKnown RBP12.37□□□□□ -0.43
CBWD3-206ENST00000478048 ZNF558Q96NG5 402 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 TGS1Q96RS0 853 aaKnown RBP12.37□□□□□ -0.43
CBWD3-206ENST00000478048 PLXNA4Q9HCM2 1894 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 ANO9A1A5B4 782 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 EPOPA6NHQ4 379 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 KCNJ18B7U540 433 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 IKBKBO14920 756 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 LRRN2O75325 713 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 B3GAT3O94766 335 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 VNN1O95497 513 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 TNNC2P02585 160 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 KRT19P08727 400 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 POLR2BP30876 1174 aaKnown RBP12.36□□□□□ -0.43
CBWD3-206ENST00000478048 KCNJ12Q14500 433 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 ZACNQ401N2 412 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 CBWD6Q4V339 395 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 CBWD3Q5JTY5 395 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 CBWD5Q5RIA9 395 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 C15orf39Q6ZRI6 1047 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 KLHL23Q8NBE8 558 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 ELMO3Q96BJ8 720 aa12.36□□□□□ -0.43
CBWD3-206ENST00000478048 SMTNL1A8MU46 457 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 BECN2A8MW95 431 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 PIRO00625 290 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 LCE2BO14633 110 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 ATP1A3P13637 1013 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 ZNF18P17022 549 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 RPL9P32969 192 aaKnown RBP12.35□□□□□ -0.43
CBWD3-206ENST00000478048 MTIF2P46199 727 aaKnown RBP12.35□□□□□ -0.43
CBWD3-206ENST00000478048 ENPEPQ07075 957 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 KCNH2Q12809 1159 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 BIRC3Q13489 604 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 TCP11X2Q5H9J9 407 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 HABP4Q5JVS0 413 aaKnown RBP12.35□□□□□ -0.43
CBWD3-206ENST00000478048 USP37Q86T82 979 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 GAS2L3Q86XJ1 694 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 FAM114A1Q8IWE2 563 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 RNF214Q8ND24 703 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 FAM200AQ8TCP9 573 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 ARNTL2Q8WYA1 636 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 IGSF21Q96ID5 467 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 UROC1Q96N76 676 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 VN1R3Q9BXE9 311 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 AAASQ9NRG9 546 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 MAGEC2Q9UBF1 373 aaPredicted RBP12.35□□□□□ -0.43
CBWD3-206ENST00000478048 ITGA11Q9UKX5 1188 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 AGAP1Q9UPQ3 857 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 PCDHB12Q9Y5F1 795 aa12.35□□□□□ -0.43
CBWD3-206ENST00000478048 C5orf67F2Z3F1 127 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 I3L4J1 428 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 SPTLC1O15269 473 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 FGF18O76093 207 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 CAVIN2O95810 425 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 BRCC3P46736 316 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 DCLRE1AQ6PJP8 1040 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 TUBGCP2Q9BSJ2 902 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 COLEC11Q9BWP8 271 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 GPR62Q9BZJ7 368 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 TTYH1Q9H313 450 aaPredicted RBP12.34□□□□□ -0.43
CBWD3-206ENST00000478048 ZNF576Q9H609 170 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 TMEM8AQ9HCN3 771 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 ALG13Q9NP73 1137 aaKnown RBP12.34□□□□□ -0.43
CBWD3-206ENST00000478048 SPG21Q9NZD8 308 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 ADAM28Q9UKQ2 775 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.34□□□□□ -0.43
CBWD3-206ENST00000478048 VWA8A3KMH1 1905 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 RFXAPO00287 272 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 PHACTR2O75167 634 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 TADA2AO75478 443 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 EEF1GP26641 437 aaKnown RBP12.34□□□□□ -0.43
CBWD3-206ENST00000478048 GTF2H1P32780 548 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 FMO5P49326 533 aa12.34□□□□□ -0.43
CBWD3-206ENST00000478048 MXI1P50539 228 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms