RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 RASEFQ8IZ41 740 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 SPARTQ8N0X7 666 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 CRIPAKQ8N1N5 446 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 SPERTQ8NA61 448 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 TRAPPC12Q8WVT3 735 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 CLP1Q92989 425 aaKnown RBP6.32□□□□□ -1.4
TRA2B-211ENST00000477939 GFM2Q969S9 779 aaKnown RBP6.32□□□□□ -1.4
TRA2B-211ENST00000477939 SDCCAG3Q96C92 435 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 ZNF689Q96CS4 500 aaPredicted RBP6.32□□□□□ -1.4
TRA2B-211ENST00000477939 PABPC5Q96DU9 382 aaKnown RBP6.32□□□□□ -1.4
TRA2B-211ENST00000477939 TCF12Q99081 682 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 RHOXF2Q9BQY4 288 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 MXRA8Q9BRK3 442 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 LRFN3Q9BTN0 628 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 ANO3Q9BYT9 981 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 FAM49AQ9H0Q0 323 aaPredicted RBP6.32□□□□□ -1.4
TRA2B-211ENST00000477939 SMARCAD1Q9H4L7 1026 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 NSUN3Q9H649 340 aaKnown RBP6.32□□□□□ -1.4
TRA2B-211ENST00000477939 RIC8AQ9NPQ8 531 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 TYW1Q9NV66 732 aaKnown RBP6.32□□□□□ -1.4
TRA2B-211ENST00000477939 SLC9A2Q9UBY0 812 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 HOOK1Q9UJC3 728 aaKnown RBP6.32□□□□□ -1.4
TRA2B-211ENST00000477939 R3HDM2Q9Y2K5 976 aaKnown RBP6.32□□□□□ -1.4
TRA2B-211ENST00000477939 ATP6V1DQ9Y5K8 247 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 FNDC1Q4ZHG4 1894 aaPredicted RBP6.32□□□□□ -1.4
TRA2B-211ENST00000477939 ZNF318Q5VUA4 2279 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 MYO15AQ9UKN7 3530 aa6.32□□□□□ -1.4
TRA2B-211ENST00000477939 MYH9P35579 1960 aaKnown RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 NFASCO94856 1347 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 IGSF9BQ9UPX0 1349 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 USP34Q70CQ2 3546 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 A6NJY4 79 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 PI4K2BG5E9Z4 385 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 ENPP3O14638 875 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 ADAMTS3O15072 1205 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 GRM6O15303 877 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 TEX28O15482 410 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 ZBTB43O43298 467 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 ZC3H11AO75152 810 aaKnown RBP eCLIP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 TSC22D2O75157 780 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 TBX10O75333 385 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 DAB1O75553 588 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 DGKIO75912 1065 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 CSPG5O95196 566 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 CCNE2O96020 404 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 MMP1P03956 469 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 CYP1A2P05177 515 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 ARP10275 920 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 RPS2P15880 293 aaKnown RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 CDC27P30260 824 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 HOXD12P35452 270 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 BMPR1AP36894 532 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 LTBRP36941 435 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 SREBF1P36956 1147 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 CLK2P49760 499 aaKnown RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 COPAP53621 1224 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 RAB15P59190 212 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 OLR1P78380 273 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 MRPS25P82663 173 aaKnown RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 AMPD3Q01432 767 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 EXOSC10Q01780 885 aaKnown RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 UBXN1Q04323 297 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 TMEM62Q0P6H9 643 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 LRRC74AQ0VAA2 488 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 PDE1CQ14123 709 aaPredicted RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 SPIDRQ14159 915 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 LBRQ14739 615 aaKnown RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 PPP1R7Q15435 360 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 MAPRE2Q15555 327 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 SNCBQ16143 134 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 RTN1Q16799 776 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 C15orf59Q2T9L4 293 aaPredicted RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 TMEM95Q3KNT9 176 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 CEP55Q53EZ4 464 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 TMEM31Q5JXX7 168 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 HYIQ5T013 277 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 NDUFAF5Q5TEU4 345 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 PDXDC2PQ6P474 469 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 ABRAXAS1Q6UWZ7 409 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 YTHDF3Q7Z739 585 aaKnown RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 ZNF598Q86UK7 904 aaKnown RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 RTN4RL1Q86UN2 441 aaPredicted RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 SYCP3Q8IZU3 236 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 GJD3Q8N144 294 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 FIBCD1Q8N539 461 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 EPS8L3Q8TE67 593 aaKnown RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 CRYGNQ8WXF5 182 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 SPOCK2Q92563 424 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 TBATAQ96M53 351 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 C11orf84Q9BUA3 381 aaPredicted RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 GBP3Q9H0R5 595 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 AGO4Q9HCK5 861 aaKnown RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 FAM217BQ9NTX9 383 aaPredicted RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 TMEM260Q9NX78 707 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 PPP1R14DQ9NXH3 145 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 BARHL2Q9NY43 387 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 HESX1Q9UBX0 185 aa6.31□□□□□ -1.4
TRA2B-211ENST00000477939 MTRF1LQ9UGC7 380 aaKnown RBP6.31□□□□□ -1.4
TRA2B-211ENST00000477939 C2CD2Q9Y426 696 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms