RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 GOLGA8CPA6NN73 597 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 RAD51CO43502 376 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 CCNT1O60563 726 aaKnown RBP13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 PSMG1O95456 288 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 ZNF12P17014 697 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 CRABP2P29373 138 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 VPS41P49754 854 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 BCAP31P51572 246 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 ERVK-9P63128 1117 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 HNRNPDQ14103 355 aaKnown RBP13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 CYTH1Q15438 398 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 LETM2Q2VYF4 491 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 KHDC1Q4VXA5 237 aaKnown RBP13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 SIGIRRQ6IA17 410 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 VSIG1Q86XK7 387 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 KCTD17Q8N5Z5 321 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 EME1Q96AY2 570 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 CCDC127Q96BQ5 260 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 MTMR8Q96EF0 704 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 AK8Q96MA6 479 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 TLR10Q9BXR5 811 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 IFIH1Q9BYX4 1025 aaKnown RBP13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 NHEJ1Q9H9Q4 299 aaPredicted RBP13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 RIC8AQ9NPQ8 531 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 KRT82Q9NSB4 513 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 TFR2Q9UP52 801 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 ATF5Q9Y2D1 282 aaPredicted RBP13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 COQ6Q9Y2Z9 468 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 NOTOA8MTQ0 251 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 CES2O00748 559 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 FOXN1O15353 648 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 CNOT3O75175 753 aaKnown RBP13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 GDF11O95390 407 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 HMOX2P30519 316 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 RPL5P46777 297 aaKnown RBP13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 RNASELQ05823 741 aaKnown RBP13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 TNIP1Q15025 636 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 CNGA2Q16280 664 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 CIAPIN1Q6FI81 312 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 TTC23LQ6PF05 361 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 SATL1Q86VE3 508 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 TTC30BQ8N4P2 665 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 OR7G1Q8NGA0 311 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 GIPC3Q8TF64 312 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 COA7Q96BR5 231 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 PAGE5Q96GU1 130 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 GMCL1Q96IK5 515 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 PRICKLE1Q96MT3 831 aaPredicted RBP13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 TCF12Q99081 682 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 FGFR1OP2Q9NVK5 253 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 DNAJB4Q9UDY4 337 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 DUSP10Q9Y6W6 482 aa13.37□□□□□ -0.27
RTFDC1-207ENST00000477573 GOLGB1Q14789 3259 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 CLRN2A0PK11 232 aa13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 OPHN1O60890 802 aa13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 GH2P01242 217 aa13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 IL4RP24394 825 aa13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 PTPN4P29074 926 aa13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 UBA7P41226 1012 aa13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 YARSP54577 528 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 TGFBIQ15582 683 aa13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 C6orf118Q5T5N4 469 aa13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 TWF2Q6IBS0 349 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 TTBK2Q6IQ55 1244 aa13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 SH3RF1Q7Z6J0 888 aa13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 FAM83AQ86UY5 434 aa13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 TBCKQ8TEA7 893 aa13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 SLC7A6OSQ96CW6 309 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 NEURL2Q9BR09 285 aa13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 TMEM59LQ9UK28 342 aa13.36□□□□□ -0.27
RTFDC1-207ENST00000477573 A0A087X0B3 334 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 ANKRD34BA5PLL1 514 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 F5H6K3 240 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 TBX10O75333 385 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 OR52Z1P0C646 297 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 SLURP2P0DP57 97 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 RPL17P18621 184 aaKnown RBP13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 SLC16A2P36021 539 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 ETV3P41162 512 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 AFMP43652 599 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 PPARDQ03181 441 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 CXCL9Q07325 125 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 KLRC3Q07444 240 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 IL17AQ16552 155 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 KLHDC10Q6PID8 442 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 VASH1Q7L8A9 365 aaPredicted RBP13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 ANKLE1Q8NAG6 615 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 STMN2Q93045 179 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 ECSITQ9BQ95 431 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 AASDHPPTQ9NRN7 309 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 ZDHHC7Q9NXF8 308 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 SMARCAL1Q9NZC9 954 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 EHD2Q9NZN4 543 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 IKBKGQ9Y6K9 419 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 SMIM23A6NLE4 172 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 USP17L10C9JJH3 530 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 PJA2O43164 708 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 IDH3BO43837 385 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 DCTN3O75935 186 aa13.35□□□□□ -0.27
RTFDC1-207ENST00000477573 BAIAP3O94812 1187 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms