RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 F5H6K3 240 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 ATP2A1O14983 1001 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 MAFKO60675 156 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 CLSTN1O94985 981 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 PDHBP11177 359 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 MYCLP1P12525 358 aaPredicted RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 GLDCP23378 1020 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 IGFBP6P24592 240 aaPredicted RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 HSPA4P34932 840 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 NEK4P51957 841 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 ANTXR2P58335 489 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 KLRC3Q07444 240 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 CREB3L3Q68CJ9 461 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 FSTL4Q6MZW2 842 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 CD300LDQ6UXZ3 194 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 UBE2R2Q712K3 238 aaPredicted RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 KCTD1Q719H9 257 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 CYB5R4Q7L1T6 521 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 RASGRP2Q7LDG7 609 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 FAM126BQ8IXS8 530 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 ENAHQ8N8S7 591 aaPredicted RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 ERO1AQ96HE7 468 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 P2RX7Q99572 595 aaKnown RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 KRT23Q9C075 422 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 RPAP3Q9H6T3 665 aaPredicted RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 RBPJLQ9UBG7 517 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 PLXNA1Q9UIW2 1896 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 SRPK3Q9UPE1 567 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 RABGAP1Q9Y3P9 1069 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 FRMPD3Q5JV73 1810 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 MYH6P13533 1939 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 ZNFX1Q9P2E3 1918 aaKnown RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 WDR19Q8NEZ3 1342 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 FAM90A27PA6NNH2 459 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 ACOT7O00154 380 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 RANBP6O60518 1105 aaKnown RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 KPNA6O60684 536 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 NPTXRO95502 500 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 LRG1P02750 347 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 C8BP07358 591 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 MED14OSP0DP75 135 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 TOP1P11387 765 aaKnown RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 PFKLP17858 780 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 LIMS1P48059 325 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 MASP1P48740 699 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 MECP2P51608 486 aaKnown RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 EPHA5P54756 1037 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 IRX3P78415 501 aaPredicted RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 CACNB2Q08289 660 aaPredicted RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 SSPNQ14714 243 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 COG2Q14746 738 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 TARBP2Q15633 366 aaKnown RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 PKN2Q16513 984 aaKnown RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 CR1LQ2VPA4 569 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 KRTAP5-3Q6L8H2 238 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 CASC1Q6TDU7 716 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 BTNL9Q6UXG8 535 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 ETV3LQ6ZN32 361 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 OTOP1Q7RTM1 612 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 CTU1Q7Z7A3 348 aaKnown RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 STK32CQ86UX6 486 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 TRIM48Q8IWZ4 208 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 SPICE1Q8N0Z3 855 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 FBXL16Q8N461 479 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 MB21D1Q8N884 522 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 SHCBP1Q8NEM2 672 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 SMCR8Q8TEV9 937 aaPredicted RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 CPA5Q8WXQ8 436 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 USP6NLQ92738 828 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 DDX11Q96FC9 970 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 TOE1Q96GM8 510 aaKnown RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 TMEM47Q9BQJ4 181 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 ARHGAP39Q9C0H5 1083 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 SLKQ9H2G2 1235 aaPredicted RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 BTBD7Q9P203 1132 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 CLIP2Q9UDT6 1046 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 CPA4Q9UI42 421 aa6.08□□□□□ -1.44
VPS45-207ENST00000477558 SMG5Q9UPR3 1016 aaKnown RBP6.08□□□□□ -1.44
VPS45-207ENST00000477558 NID2Q14112 1375 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 ZNF536O15090 1300 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 TNKSO95271 1327 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 VWA5AO00534 786 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 NFIBO00712 420 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 REC8O95072 547 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 POU3F2P20265 443 aaPredicted RBP6.07□□□□□ -1.44
VPS45-207ENST00000477558 FLT3P36888 993 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 OAZ1P54368 228 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 PRMT2P55345 433 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 TROAPQ12815 778 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 SKOR2Q2VWA4 1001 aaPredicted RBP6.07□□□□□ -1.44
VPS45-207ENST00000477558 CCDC178Q5BJE1 867 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 RRP12Q5JTH9 1297 aaKnown RBP6.07□□□□□ -1.44
VPS45-207ENST00000477558 FAM83BQ5T0W9 1011 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 BTBD8Q5XKL5 378 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 CPZQ66K79 652 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 SLFN13Q68D06 897 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 FBXO46Q6PJ61 603 aaPredicted RBP6.07□□□□□ -1.44
VPS45-207ENST00000477558 SGMS1Q86VZ5 419 aa6.07□□□□□ -1.44
VPS45-207ENST00000477558 IQCA1Q86XH1 822 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms