RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 ADRB2P07550 413 aa12.36□□□□□ -0.43
HDLBP-236ENST00000477477 PLCG1P19174 1290 aa12.36□□□□□ -0.43
HDLBP-236ENST00000477477 UBA7P41226 1012 aa12.36□□□□□ -0.43
HDLBP-236ENST00000477477 GUCY2FP51841 1108 aa12.36□□□□□ -0.43
HDLBP-236ENST00000477477 GRM2Q14416 872 aa12.36□□□□□ -0.43
HDLBP-236ENST00000477477 ENOX2Q16206 610 aaKnown RBP12.36□□□□□ -0.43
HDLBP-236ENST00000477477 ZNF852Q6ZMS4 543 aa12.36□□□□□ -0.43
HDLBP-236ENST00000477477 MYCT1Q8N699 235 aa12.36□□□□□ -0.43
HDLBP-236ENST00000477477 LEMD2Q8NC56 503 aa12.36□□□□□ -0.43
HDLBP-236ENST00000477477 CLDN23Q96B33 292 aa12.36□□□□□ -0.43
HDLBP-236ENST00000477477 ZNF512Q96ME7 567 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-236ENST00000477477 OXCT2Q9BYC2 517 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-236ENST00000477477 RPF1Q9H9Y2 349 aaKnown RBP12.36□□□□□ -0.43
HDLBP-236ENST00000477477 PARVGQ9HBI0 331 aa12.36□□□□□ -0.43
HDLBP-236ENST00000477477 ASAH2Q9NR71 780 aa12.36□□□□□ -0.43
HDLBP-236ENST00000477477 HEBP1Q9NRV9 189 aa12.36□□□□□ -0.43
HDLBP-236ENST00000477477 FBXO4Q9UKT5 387 aa12.36□□□□□ -0.43
HDLBP-236ENST00000477477 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-236ENST00000477477 TIMM13Q9Y5L4 95 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-236ENST00000477477 A0A0B4J269 797 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 OR6C75A6NL08 312 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 SHISA7A6NL88 538 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 PPEF2O14830 753 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 TRAK2O60296 914 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 VNN2O95498 520 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 OR4Q2P0C623 313 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 MYL4P12829 197 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 GJA1P17302 382 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 LONP1P36776 959 aaKnown RBP12.35□□□□□ -0.43
HDLBP-236ENST00000477477 RPS9P46781 194 aaKnown RBP12.35□□□□□ -0.43
HDLBP-236ENST00000477477 ID4P47928 161 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 FOXK2Q01167 660 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 GRIN1Q05586 938 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 DHX8Q14562 1220 aaKnown RBP12.35□□□□□ -0.43
HDLBP-236ENST00000477477 MCM6Q14566 821 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 KARSQ15046 597 aaKnown RBP12.35□□□□□ -0.43
HDLBP-236ENST00000477477 ZNF528Q3MIS6 628 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 SPATA1Q5VX52 437 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 LARP1BQ659C4 914 aaKnown RBP12.35□□□□□ -0.43
HDLBP-236ENST00000477477 SLC39A4Q6P5W5 647 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 VITQ6UXI7 678 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 DSTYKQ6XUX3 929 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 USP37Q86T82 979 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 RAD54LQ92698 747 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 SMARCD2Q92925 531 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 ZSWIM3Q96MP5 696 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 PGLYRP2Q96PD5 576 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 TSPAN18Q96SJ8 248 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 FIZ1Q96SL8 496 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 NELL2Q99435 816 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 MSTO1Q9BUK6 570 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 TRMT61BQ9BVS5 477 aaKnown RBP12.35□□□□□ -0.43
HDLBP-236ENST00000477477 BRD9Q9H8M2 597 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 UPF2Q9HAU5 1272 aaKnown RBP12.35□□□□□ -0.43
HDLBP-236ENST00000477477 TRPV4Q9HBA0 871 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 MRPS17Q9Y2R5 130 aaKnown RBP12.35□□□□□ -0.43
HDLBP-236ENST00000477477 DCHS1Q96JQ0 3298 aa12.35□□□□□ -0.43
HDLBP-236ENST00000477477 PDCD11Q14690 1871 aaKnown RBP12.34□□□□□ -0.43
HDLBP-236ENST00000477477 NCAM2O15394 837 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 KINO60870 393 aaKnown RBP12.34□□□□□ -0.43
HDLBP-236ENST00000477477 TBCAO75347 108 aaKnown RBP12.34□□□□□ -0.43
HDLBP-236ENST00000477477 KRT18P05783 430 aaKnown RBP12.34□□□□□ -0.43
HDLBP-236ENST00000477477 TYMPP19971 482 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 ABCD1P33897 745 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 GPR17Q13304 367 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 PLD1Q13393 1074 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 FZD5Q13467 585 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 MYBPC2Q14324 1141 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 TEAD2Q15562 447 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 JADE1Q6IE81 842 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 BRAPQ7Z569 592 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 TMC8Q8IU68 726 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 MAP4K3Q8IVH8 894 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 CD302Q8IX05 232 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 RASSF8Q8NHQ8 419 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 SHKBP1Q8TBC3 707 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 ZSCAN18Q8TBC5 510 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-236ENST00000477477 DEPDC1BQ8WUY9 529 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 LARP4BQ92615 738 aaKnown RBP12.34□□□□□ -0.43
HDLBP-236ENST00000477477 IRF7Q92985 503 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 LRRC3Q9BY71 257 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 DNAJC25Q9H1X3 360 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 CRISPLD1Q9H336 500 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 ZHX3Q9H4I2 956 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 TRPV5Q9NQA5 729 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 CPSF3Q9UKF6 684 aaKnown RBP12.34□□□□□ -0.43
HDLBP-236ENST00000477477 NCANO14594 1321 aa12.34□□□□□ -0.43
HDLBP-236ENST00000477477 OTOGLQ3ZCN5 2332 aa12.33□□□□□ -0.44
HDLBP-236ENST00000477477 FRYLO94915 3013 aa12.33□□□□□ -0.44
HDLBP-236ENST00000477477 CACNA1IQ9P0X4 2223 aa12.33□□□□□ -0.44
HDLBP-236ENST00000477477 GPR179Q6PRD1 2367 aa12.33□□□□□ -0.44
HDLBP-236ENST00000477477 MTMR11A4FU01 709 aa12.33□□□□□ -0.44
HDLBP-236ENST00000477477 MAN2B1O00754 1011 aa12.33□□□□□ -0.44
HDLBP-236ENST00000477477 SPTLC1O15269 473 aa12.33□□□□□ -0.44
HDLBP-236ENST00000477477 CENPBP07199 599 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-236ENST00000477477 NFICP08651 508 aa12.33□□□□□ -0.44
HDLBP-236ENST00000477477 ODC1P11926 461 aa12.33□□□□□ -0.44
HDLBP-236ENST00000477477 PSMC3P17980 439 aa12.33□□□□□ -0.44
HDLBP-236ENST00000477477 PAX3P23760 479 aa12.33□□□□□ -0.44
HDLBP-236ENST00000477477 NMT1P30419 496 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms