RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 USP37Q86T82 979 aa18.16■□□□□ 0.5
EPHB4-204ENST00000477446 COLGALT1Q8NBJ5 622 aa18.16■□□□□ 0.5
EPHB4-204ENST00000477446 TMEM175Q9BSA9 504 aa18.16■□□□□ 0.5
EPHB4-204ENST00000477446 DPP3Q9NY33 737 aa18.16■□□□□ 0.5
EPHB4-204ENST00000477446 ADGRG1Q9Y653 693 aa18.16■□□□□ 0.5
EPHB4-204ENST00000477446 NT5C1B-RDH14C9J2C7 533 aa18.15■□□□□ 0.5
EPHB4-204ENST00000477446 NRP1O14786 923 aa18.15■□□□□ 0.5
EPHB4-204ENST00000477446 SLU7O95391 586 aaKnown RBP18.15■□□□□ 0.5
EPHB4-204ENST00000477446 OR1G1P47890 313 aa18.15■□□□□ 0.5
EPHB4-204ENST00000477446 ALDH7A1P49419 539 aaKnown RBP18.15■□□□□ 0.5
EPHB4-204ENST00000477446 UPP1Q16831 310 aa18.15■□□□□ 0.5
EPHB4-204ENST00000477446 KCNT2Q6UVM3 1135 aa18.15■□□□□ 0.5
EPHB4-204ENST00000477446 TOGARAM2Q6ZUX3 1019 aa18.15■□□□□ 0.5
EPHB4-204ENST00000477446 C1orf127Q8N9H9 656 aa18.15■□□□□ 0.5
EPHB4-204ENST00000477446 ZNF397Q8NF99 534 aaPredicted RBP18.15■□□□□ 0.5
EPHB4-204ENST00000477446 TIFAQ96CG3 184 aa18.15■□□□□ 0.5
EPHB4-204ENST00000477446 ANKRD36BP1Q96IX9 119 aa18.15■□□□□ 0.5
EPHB4-204ENST00000477446 UROC1Q96N76 676 aa18.15■□□□□ 0.5
EPHB4-204ENST00000477446 ZNF558Q96NG5 402 aa18.15■□□□□ 0.5
EPHB4-204ENST00000477446 DNAJC7Q99615 494 aa18.15■□□□□ 0.5
EPHB4-204ENST00000477446 C17orf80Q9BSJ5 609 aa18.15■□□□□ 0.5
EPHB4-204ENST00000477446 SLC28A3Q9HAS3 691 aa18.15■□□□□ 0.5
EPHB4-204ENST00000477446 FAN1Q9Y2M0 1017 aa18.15■□□□□ 0.5
EPHB4-204ENST00000477446 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.15■□□□□ 0.5
EPHB4-204ENST00000477446 TNNC2P02585 160 aa18.14■□□□□ 0.49
EPHB4-204ENST00000477446 IGFBP6P24592 240 aaPredicted RBP18.14■□□□□ 0.49
EPHB4-204ENST00000477446 LRPAP1P30533 357 aa18.14■□□□□ 0.49
EPHB4-204ENST00000477446 PPP3CAQ08209 521 aa18.14■□□□□ 0.49
EPHB4-204ENST00000477446 DCAF17Q5H9S7 520 aaPredicted RBP18.14■□□□□ 0.49
EPHB4-204ENST00000477446 TCERG1LQ5VWI1 586 aa18.14■□□□□ 0.49
EPHB4-204ENST00000477446 PPP2R2DQ66LE6 453 aa18.14■□□□□ 0.49
EPHB4-204ENST00000477446 SCARA3Q6AZY7 606 aa18.14■□□□□ 0.49
EPHB4-204ENST00000477446 TRIM59Q8IWR1 403 aa18.14■□□□□ 0.49
EPHB4-204ENST00000477446 SLC35C1Q96A29 364 aa18.14■□□□□ 0.49
EPHB4-204ENST00000477446 EDEM3Q9BZQ6 932 aa18.14■□□□□ 0.49
EPHB4-204ENST00000477446 AAASQ9NRG9 546 aa18.14■□□□□ 0.49
EPHB4-204ENST00000477446 ZNHIT6Q9NWK9 470 aaKnown RBP18.14■□□□□ 0.49
EPHB4-204ENST00000477446 DNAI1Q9UI46 699 aa18.14■□□□□ 0.49
EPHB4-204ENST00000477446 SOWAHDA6NJG2 315 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 F8W810 466 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 SOX1O00570 391 aaPredicted RBP18.13■□□□□ 0.49
EPHB4-204ENST00000477446 PODXLO00592 558 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 RRP9O43818 475 aaKnown RBP18.13■□□□□ 0.49
EPHB4-204ENST00000477446 C4BPAP04003 597 aaKnown RBP18.13■□□□□ 0.49
EPHB4-204ENST00000477446 ITGB3P05106 788 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 RPL9P32969 192 aaKnown RBP18.13■□□□□ 0.49
EPHB4-204ENST00000477446 BMPR1AP36894 532 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 GCLMP48507 274 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 AP3M2P53677 418 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 ZBED6P86452 979 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 MIIPQ5JXC2 388 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 C9orf57Q5W0N0 161 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 RAD9BQ6WBX8 426 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 TRAPPC11Q7Z392 1133 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 CXorf38Q8TB03 319 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 DDX27Q96GQ7 796 aaKnown RBP18.13■□□□□ 0.49
EPHB4-204ENST00000477446 TGS1Q96RS0 853 aaKnown RBP18.13■□□□□ 0.49
EPHB4-204ENST00000477446 MMRN2Q9H8L6 949 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 ITGA11Q9UKX5 1188 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 MTUS1Q9ULD2 1270 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 PRG3Q9Y2Y8 225 aaPredicted RBP18.13■□□□□ 0.49
EPHB4-204ENST00000477446 RWDD3Q9Y3V2 267 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 PCDHB12Q9Y5F1 795 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 CHD9Q3L8U1 2897 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 ANO9A1A5B4 782 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 PPEF2O14830 753 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 TRIM21P19474 475 aaKnown RBP18.13■□□□□ 0.49
EPHB4-204ENST00000477446 CASQ1P31415 396 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 CTNNB1P35222 781 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 ERVK-21P61565 698 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 CDK17Q00537 523 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 EPC2Q52LR7 807 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 TDRD10Q5VZ19 366 aaKnown RBP18.13■□□□□ 0.49
EPHB4-204ENST00000477446 C15orf39Q6ZRI6 1047 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 SV2AQ7L0J3 742 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 TMEM173Q86WV6 379 aaPredicted RBP18.13■□□□□ 0.49
EPHB4-204ENST00000477446 SLC39A11Q8N1S5 342 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 C3orf58Q8NDZ4 430 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 NDST4Q9H3R1 872 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 MARCH5Q9NX47 278 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 MYO1AQ9UBC5 1043 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 SIX4Q9UIU6 781 aa18.13■□□□□ 0.49
EPHB4-204ENST00000477446 SCN1AP35498 2009 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 PIRO00625 290 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 B3GAT3O94766 335 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 KIF4AO95239 1232 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 ITGB1P05556 798 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 KRT19P08727 400 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 GTF2H1P32780 548 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 TUBB2AQ13885 445 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 MEA1Q16626 185 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 ZACNQ401N2 412 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 DCLRE1AQ6PJP8 1040 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 CD300LGQ6UXG3 332 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 HASPINQ8TF76 798 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 BCL7CQ8WUZ0 217 aaPredicted RBP18.12■□□□□ 0.49
EPHB4-204ENST00000477446 SAMD11Q96NU1 681 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 TUBB2BQ9BVA1 445 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 COLEC11Q9BWP8 271 aa18.12■□□□□ 0.49
EPHB4-204ENST00000477446 TTYH3Q9C0H2 523 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms