RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 MIPOL1Q8TD10 442 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 CADM1Q9BY67 442 aaKnown RBP16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 PPP1R12CQ9BZL4 782 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 MIS12Q9H081 205 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 TBK1Q9UHD2 729 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 FRMD4BQ9Y2L6 1034 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 GREB1LQ9C091 1923 aaPredicted RBP16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 HAUS5O94927 633 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 TBC1D10BQ4KMP7 808 aaPredicted RBP16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 TMEM179Q6ZVK1 233 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 PSPC1Q8WXF1 523 aaKnown RBP16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 LZICQ8WZA0 190 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 MIPEPQ99797 713 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 TMEM39BQ9GZU3 492 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 TRABDQ9H4I3 376 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 GTF3C4Q9UKN8 822 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 SH3BP1Q9Y3L3 701 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 ZNFX1Q9P2E3 1918 aaKnown RBP16.15■□□□□ 0.18
CLSTN1-205ENST00000477264 TTC36A6NLP5 189 aa16.15■□□□□ 0.18
CLSTN1-205ENST00000477264 CLIC2O15247 247 aa16.15■□□□□ 0.18
CLSTN1-205ENST00000477264 TGFB1I1O43294 461 aa16.15■□□□□ 0.18
CLSTN1-205ENST00000477264 PYGLP06737 847 aa16.15■□□□□ 0.18
CLSTN1-205ENST00000477264 SETSIPP0DME0 302 aa16.15■□□□□ 0.18
CLSTN1-205ENST00000477264 HHATQ5VTY9 493 aa16.15■□□□□ 0.18
CLSTN1-205ENST00000477264 HS2ST1Q7LGA3 356 aa16.15■□□□□ 0.18
CLSTN1-205ENST00000477264 LRRC47Q8N1G4 583 aaKnown RBP16.15■□□□□ 0.18
CLSTN1-205ENST00000477264 CCDC89Q8N998 374 aa16.15■□□□□ 0.18
CLSTN1-205ENST00000477264 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.15■□□□□ 0.181e-10■■□□□ 12.4
CLSTN1-205ENST00000477264 HAPLN3Q96S86 360 aa16.15■□□□□ 0.18
CLSTN1-205ENST00000477264 ANKFY1Q9P2R3 1169 aa16.15■□□□□ 0.18
CLSTN1-205ENST00000477264 DNAJB4Q9UDY4 337 aa16.15■□□□□ 0.18
CLSTN1-205ENST00000477264 EXOC1LA0A1B0GW35 172 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 NDC80O14777 642 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 P4HA2O15460 535 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 GDF11O95390 407 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 EGFRP00533 1210 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 MYH11P35749 1972 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 PABPC4Q13310 644 aaKnown RBP eCLIP16.14■□□□□ 0.176e-6■■■■■ 28.1
CLSTN1-205ENST00000477264 ACSBG2Q5FVE4 666 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 FAM91A1Q658Y4 838 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 CATSPER3Q86XQ3 398 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 CLEC10AQ8IUN9 316 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 PHC3Q8NDX5 983 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 NRG4Q8WWG1 115 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 GJA10Q969M2 543 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 MCUR1Q96AQ8 359 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 PTCD3Q96EY7 689 aaKnown RBP16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 NDNQ99608 321 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 SEL1LQ9UBV2 794 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 DNAJC6O75061 913 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 ZBED4O75132 1171 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 KRT36O76013 467 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 MYBL1P10243 752 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 CETN1Q12798 172 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 MYBPC2Q14324 1141 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 KRT72Q14CN4 511 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 ARHGAP44Q17R89 818 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 RFWD3Q6PCD5 774 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 OTOAQ7RTW8 1153 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 SLC20A1Q8WUM9 679 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 SPATA16Q9BXB7 569 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 DCLK3Q9C098 648 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 RNF181Q9P0P0 153 aa16.14■□□□□ 0.17
CLSTN1-205ENST00000477264 FRMPD2Q68DX3 1309 aaPredicted RBP16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 GSTTP1A0A1W2PQM5 241 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 F8W8V4 182 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 FOXN3O00409 490 aaPredicted RBP16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 GYG2O15488 501 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 GSC2O15499 205 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 CLDN3O15551 220 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 YBX3P16989 372 aaKnown RBP eCLIP16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 ADCY8P40145 1251 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 SPIRE1Q08AE8 756 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 RASA3Q14644 834 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 CBWD6Q4V339 395 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 PABPC1LQ4VXU2 614 aaKnown RBP16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 CBWD3Q5JTY5 395 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 CBWD5Q5RIA9 395 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 DPY19L2Q6NUT2 758 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 SEPT14Q6ZU15 432 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 ZCCHC9Q8N567 271 aaKnown RBP16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 NSL1Q96IY1 281 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 NUP85Q9BW27 656 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 ASCC2Q9H1I8 757 aaPredicted RBP16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 SLCO1B3Q9NPD5 702 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 DMAC2Q9NW81 257 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 GMEB1Q9Y692 573 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 FOXO6A8MYZ6 492 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 SMAPO00193 183 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 LYNP07948 512 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 CHRNB2P17787 502 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 AP3B2Q13367 1082 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 CNPY1Q3B7I2 92 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 SH2D4BQ5SQS7 431 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 DSTYKQ6XUX3 929 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 C1orf54Q8WWF1 131 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 POP1Q99575 1024 aaKnown RBP16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 RUSC1Q9BVN2 902 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 PSTPIP2Q9H939 334 aa16.13■□□□□ 0.17
CLSTN1-205ENST00000477264 GPRC5DQ9NZD1 345 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms