RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SEPT11Q9NVA2 429 aaKnown RBP15.48■□□□□ 0.07
COL4A6-206ENST00000477085 MYO1AQ9UBC5 1043 aa15.48■□□□□ 0.07
COL4A6-206ENST00000477085 BUB1O43683 1085 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 CLSTN1O94985 981 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 CD4P01730 458 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 ATICP31939 592 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 PDE6CP51160 858 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 PAK2Q13177 524 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 GPNMBQ14956 572 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 SECISBP2LQ93073 1101 aaKnown RBP15.47■□□□□ 0.07
COL4A6-206ENST00000477085 ISCUQ9H1K1 167 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 ANO9A1A5B4 782 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 RIOK3O14730 519 aaKnown RBP15.47■□□□□ 0.07
COL4A6-206ENST00000477085 CAND2O75155 1236 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 STAU1O95793 577 aaKnown RBP15.47■□□□□ 0.07
COL4A6-206ENST00000477085 H2AFZP0C0S5 128 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 ATF7P17544 494 aaPredicted RBP15.47■□□□□ 0.07
COL4A6-206ENST00000477085 IGFBP6P24592 240 aaPredicted RBP15.47■□□□□ 0.07
COL4A6-206ENST00000477085 SSTR3P32745 418 aaPredicted RBP15.47■□□□□ 0.07
COL4A6-206ENST00000477085 ZNF394Q53GI3 561 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 ZNF667Q5HYK9 610 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 C9orf57Q5W0N0 161 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 AGMOQ6ZNB7 445 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 H2AFVQ71UI9 128 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 MRPL10Q7Z7H8 261 aaKnown RBP15.47■□□□□ 0.07
COL4A6-206ENST00000477085 RTN4RL1Q86UN2 441 aaPredicted RBP15.47■□□□□ 0.07
COL4A6-206ENST00000477085 WHAMMQ8TF30 809 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 GOLGA2P5Q9HBQ8 144 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 MIOSQ9NXC5 875 aa15.47■□□□□ 0.07
COL4A6-206ENST00000477085 RALGAPA2Q2PPJ7 1873 aa15.46■□□□□ 0.07
COL4A6-206ENST00000477085 CITO14578 2027 aa15.46■□□□□ 0.07
COL4A6-206ENST00000477085 TRIP11Q15643 1979 aa15.46■□□□□ 0.07
COL4A6-206ENST00000477085 BTNL10A8MVZ5 291 aa15.46■□□□□ 0.07
COL4A6-206ENST00000477085 FTLP02792 175 aaPredicted RBP15.46■□□□□ 0.07
COL4A6-206ENST00000477085 ARHGEF26Q96DR7 871 aa15.46■□□□□ 0.07
COL4A6-206ENST00000477085 PPP1R10Q96QC0 940 aaKnown RBP15.46■□□□□ 0.07
COL4A6-206ENST00000477085 TWNKQ96RR1 684 aa15.46■□□□□ 0.07
COL4A6-206ENST00000477085 TRAIPQ9BWF2 469 aa15.46■□□□□ 0.07
COL4A6-206ENST00000477085 CRISPLD2Q9H0B8 497 aa15.46■□□□□ 0.07
COL4A6-206ENST00000477085 THAP2Q9H0W7 228 aa15.46■□□□□ 0.07
COL4A6-206ENST00000477085 INTUQ9ULD6 942 aa15.46■□□□□ 0.07
COL4A6-206ENST00000477085 SQORQ9Y6N5 450 aa15.46■□□□□ 0.07
COL4A6-206ENST00000477085 ATP8B3O60423 1300 aa15.46■□□□□ 0.06
COL4A6-206ENST00000477085 PIRO00625 290 aa15.45■□□□□ 0.06
COL4A6-206ENST00000477085 ENC1O14682 589 aa15.45■□□□□ 0.06
COL4A6-206ENST00000477085 SPTLC1O15269 473 aa15.45■□□□□ 0.06
COL4A6-206ENST00000477085 HSPA8P11142 646 aaKnown RBP15.45■□□□□ 0.06
COL4A6-206ENST00000477085 UNGP13051 313 aaPredicted RBP15.45■□□□□ 0.06
COL4A6-206ENST00000477085 GNA15P30679 374 aa15.45■□□□□ 0.06
COL4A6-206ENST00000477085 RNF10Q8N5U6 811 aaKnown RBP15.45■□□□□ 0.06
COL4A6-206ENST00000477085 BEST2Q8NFU1 509 aa15.45■□□□□ 0.06
COL4A6-206ENST00000477085 TFAP2BQ92481 460 aa15.45■□□□□ 0.06
COL4A6-206ENST00000477085 FAXDC2Q96IV6 333 aa15.45■□□□□ 0.06
COL4A6-206ENST00000477085 ZNF333Q96JL9 665 aa15.45■□□□□ 0.06
COL4A6-206ENST00000477085 ADAM2Q99965 735 aa15.45■□□□□ 0.06
COL4A6-206ENST00000477085 L2HGDHQ9H9P8 463 aa15.45■□□□□ 0.06
COL4A6-206ENST00000477085 HMGXB4Q9UGU5 601 aa15.45■□□□□ 0.06
COL4A6-206ENST00000477085 UBQLN1Q9UMX0 589 aaKnown RBP15.45■□□□□ 0.06
COL4A6-206ENST00000477085 A0A0U1RQF3 1178 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 ZNF623O75123 536 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 URI1O94763 535 aaPredicted RBP15.44■□□□□ 0.06
COL4A6-206ENST00000477085 TMEM253P0C7T8 217 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 GZMAP12544 262 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 ITGA4P13612 1032 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 ZSCAN20P17040 1043 aaPredicted RBP15.44■□□□□ 0.06
COL4A6-206ENST00000477085 ABCB4P21439 1286 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 MLH1P40692 756 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 RAD23BP54727 409 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 BPIFB4P59827 614 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 ORC1Q13415 861 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 CLEC16AQ2KHT3 1053 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 USP38Q8NB14 1042 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 ZNF606Q8WXB4 792 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 LINC01599Q8WXQ3 324 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 GAD1Q99259 594 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 LUC7LQ9NQ29 371 aaKnown RBP15.44■□□□□ 0.06
COL4A6-206ENST00000477085 CACNG4Q9UBN1 327 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 NME7Q9Y5B8 376 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 RTN2O75298 545 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 TFRCP02786 760 aaKnown RBP15.44■□□□□ 0.06
COL4A6-206ENST00000477085 CYP1A1P04798 512 aaPredicted RBP15.44■□□□□ 0.06
COL4A6-206ENST00000477085 ATP1A1P05023 1023 aaKnown RBP15.44■□□□□ 0.06
COL4A6-206ENST00000477085 CTU1Q7Z7A3 348 aaKnown RBP15.44■□□□□ 0.06
COL4A6-206ENST00000477085 ZNF677Q86XU0 584 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 CYFIP2Q96F07 1278 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 TSPAN18Q96SJ8 248 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 ELOVL4Q9GZR5 314 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 OSGEPQ9NPF4 335 aa15.44■□□□□ 0.06
COL4A6-206ENST00000477085 CHORDC1Q9UHD1 332 aaPredicted RBP15.44■□□□□ 0.06
COL4A6-206ENST00000477085 GRID2IPA4D2P6 1211 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 CTAGE9A4FU28 777 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 ANKRD62A6NC57 917 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 ARL5CA6NH57 179 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 NBNO60934 754 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 CILPO75339 1184 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 PALMO75781 387 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 CYP3A5P20815 502 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 BRD2P25440 801 aaKnown RBP15.43■□□□□ 0.06
COL4A6-206ENST00000477085 ATN1P54259 1190 aaPredicted RBP15.43■□□□□ 0.06
COL4A6-206ENST00000477085 AMPD2Q01433 879 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms