RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 TXLNGQ9NUQ3 528 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 TBC1D23Q9NUY8 699 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 SAGE1Q9NXZ1 904 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ABI2Q9NYB9 513 aaPredicted RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 THEGQ9P2T0 379 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 UVRAGQ9P2Y5 699 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 DOLKQ9UPQ8 538 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 DNM3Q9UQ16 869 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 TRAF3IP3Q9Y228 551 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 MRPL11Q9Y3B7 192 aaKnown RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 RWDD3Q9Y3V2 267 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 SYNJ2O15056 1496 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ADGRL2O95490 1459 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 PZPP20742 1482 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 TRAV6A0A075B6T7 132 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 PVALEFA0A1B0GWK0 134 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 BACH1O14867 736 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 RGS13O14921 159 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 KLHL41O60662 606 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 UFL1O94874 794 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 DKK1O94907 266 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 INMTO95050 263 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 F2P00734 622 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 PRLP01236 227 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 PGRP06401 933 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 ESRRAP11474 423 aaPredicted RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 GYS1P13807 737 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 CRABP2P29373 138 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 PRKAR1BP31321 381 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 RPL9P32969 192 aaKnown RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 RCVRNP35243 200 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 PTGS2P35354 604 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 HNF1BP35680 557 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 PSMC2P35998 433 aaKnown RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 ECE1P42892 770 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 CLK3P49761 638 aaKnown RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 C2orf54Q08AI8 447 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 SQLEQ14534 574 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 KRT71Q3SY84 523 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 ARSHQ5FYA8 562 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 HERC4Q5GLZ8 1057 aaPredicted RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 PPP6R3Q5H9R7 873 aaPredicted RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 WDR44Q5JSH3 913 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 KIAA1841Q6NSI8 718 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 PDXDC2PQ6P474 469 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 CFAP161Q6P656 301 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 DHRS4L2Q6PKH6 230 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 PPP1R21Q6ZMI0 780 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 LRRC74BQ6ZQY2 392 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 TMTC3Q6ZXV5 915 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 HS2ST1Q7LGA3 356 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 PEX26Q7Z412 305 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 HEATR4Q86WZ0 1026 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 C16orf71Q8IYS4 520 aaPredicted RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 SLC17A8Q8NDX2 589 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 SUPT20HQ8NEM7 779 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 CDC26Q8NHZ8 85 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 PRPF31Q8WWY3 499 aaKnown RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 HLA-CQ95604 372 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 NXPE3Q969Y0 559 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 SH3KBP1Q96B97 665 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 CEP95Q96GE4 821 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 TRMT2BQ96GJ1 504 aaKnown RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 ALPK1Q96QP1 1244 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 SMAD5Q99717 465 aaKnown RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 DDX50Q9BQ39 737 aaKnown RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.37□□□□□ -1.71
CD55-208ENST00000476590 IFT22Q9H7X7 185 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 MARCH7Q9H992 704 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 USP29Q9HBJ7 922 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 RXFP1Q9HBX9 757 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 RIC8AQ9NPQ8 531 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 DDX18Q9NVP1 670 aaKnown RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 SIRT5Q9NXA8 310 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 DBF4Q9UBU7 674 aaPredicted RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 CHIC2Q9UKJ5 165 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 RCOR1Q9UKL0 485 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 PCDHGA3Q9Y5H0 932 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 CAPN6Q9Y6Q1 641 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 ADGRL1O94910 1474 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 ZC3H13Q5T200 1668 aaKnown RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 KIAA0586Q9BVV6 1533 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 NUP155O75694 1391 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 RNF17Q9BXT8 1623 aaKnown RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 MYOM1P52179 1685 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 GOLGA8QA0A0J9YX86 632 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 PNMA6EA0A0J9YXQ4 647 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 ANO9A1A5B4 782 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 GOLGA8OA6NCC3 632 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 SMIM23A6NLE4 172 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 SFI1A8K8P3 1242 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 GOLGA8NF8WBI6 632 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 GOLGA8RI6L899 631 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 VILLO15195 856 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 GPR182O15218 404 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 AQP9O43315 295 aa4.37□□□□□ -1.71
CD55-208ENST00000476590 XPOTO43592 962 aaKnown RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 CTNND1O60716 968 aaKnown RBP4.37□□□□□ -1.71
CD55-208ENST00000476590 GPC4O75487 556 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms