RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 C6orf50Q9HD87 102 aa7.16□□□□□ -1.26
CLDN4-205ENST00000476494 FSCN3Q9NQT6 498 aa7.16□□□□□ -1.26
CLDN4-205ENST00000476494 DNAAF2Q9NVR5 837 aaKnown RBP7.16□□□□□ -1.26
CLDN4-205ENST00000476494 SNTG2Q9NY99 539 aa7.16□□□□□ -1.26
CLDN4-205ENST00000476494 GTSE1Q9NYZ3 720 aa7.16□□□□□ -1.26
CLDN4-205ENST00000476494 PCDHA4Q9UN74 947 aa7.16□□□□□ -1.26
CLDN4-205ENST00000476494 SLC8A2Q9UPR5 921 aa7.16□□□□□ -1.26
CLDN4-205ENST00000476494 AKT3Q9Y243 479 aa7.16□□□□□ -1.26
CLDN4-205ENST00000476494 CEP192Q8TEP8 1941 aa7.16□□□□□ -1.26
CLDN4-205ENST00000476494 PLXND1Q9Y4D7 1925 aa7.16□□□□□ -1.26
CLDN4-205ENST00000476494 KNL1Q8NG31 2342 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 ENO4A6NNW6 628 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 BMP15O95972 392 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 C6P13671 934 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 PTPN2P17706 415 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 POU3F2P20265 443 aaPredicted RBP7.15□□□□□ -1.26
CLDN4-205ENST00000476494 HOXA11P31270 313 aaPredicted RBP7.15□□□□□ -1.26
CLDN4-205ENST00000476494 NAPAP54920 295 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 GUCY1B3Q02153 619 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 CACNB1Q02641 598 aaPredicted RBP7.15□□□□□ -1.26
CLDN4-205ENST00000476494 FOXD4L5Q5VV16 416 aaPredicted RBP7.15□□□□□ -1.26
CLDN4-205ENST00000476494 SWSAP1Q6NVH7 229 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 KRT25Q7Z3Z0 450 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 HEATR3Q7Z4Q2 680 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 FERMT3Q86UX7 667 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 HOMER1Q86YM7 354 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 SYT12Q8IV01 421 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 BLIDQ8IZY5 108 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 OR2I1PQ8NGU4 316 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 FOXD4L4Q8WXT5 416 aaPredicted RBP7.15□□□□□ -1.26
CLDN4-205ENST00000476494 PGBD4Q96DM1 585 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 AIFM3Q96NN9 605 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 CEP89Q96ST8 783 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 MXRA8Q9BRK3 442 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 APOL6Q9BWW8 343 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 NUSAP1Q9BXS6 441 aaKnown RBP7.15□□□□□ -1.26
CLDN4-205ENST00000476494 RNF39Q9H2S5 420 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 FBRSL1Q9HCM7 1045 aaKnown RBP7.15□□□□□ -1.26
CLDN4-205ENST00000476494 ZNF302Q9NR11 478 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 HSPBP1Q9NZL4 362 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 VPS54Q9P1Q0 977 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 PILRBQ9UKJ0 227 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 ADAM28Q9UKQ2 775 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 NOL7Q9UMY1 257 aaKnown RBP7.15□□□□□ -1.26
CLDN4-205ENST00000476494 CEP131Q9UPN4 1083 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 CNTNAP2Q9UHC6 1331 aa7.15□□□□□ -1.26
CLDN4-205ENST00000476494 ZFHX3Q15911 3703 aa7.15□□□□□ -1.27
CLDN4-205ENST00000476494 ICE1Q9Y2F5 2266 aa7.15□□□□□ -1.27
CLDN4-205ENST00000476494 A0A087WZ62 844 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 SMCO2A6NFE2 343 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 ARL5CA6NH57 179 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 BTBD18B2RXH4 712 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 TNFRSF10BO14763 440 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 ATG13O75143 517 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 YEATS4O95619 227 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 MBD3O95983 291 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 GBP1P32455 592 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 PTGER3P43115 390 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 KPNA1P52294 538 aaPredicted RBP7.14□□□□□ -1.27
CLDN4-205ENST00000476494 DNM1Q05193 864 aaKnown RBP7.14□□□□□ -1.27
CLDN4-205ENST00000476494 ORC2Q13416 577 aaPredicted RBP7.14□□□□□ -1.27
CLDN4-205ENST00000476494 WWC2Q6AWC2 1192 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 SYT13Q7L8C5 426 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 RASSF3Q86WH2 238 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 BOD1L1Q8NFC6 3051 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 TTC8Q8TAM2 541 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 CSGALNACT1Q8TDX6 532 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 RABGGTAQ92696 567 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 EZH1Q92800 747 aaPredicted RBP7.14□□□□□ -1.27
CLDN4-205ENST00000476494 FNBP1Q96RU3 617 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 TMEM209Q96SK2 561 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 MAP7D2Q96T17 732 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 FDXACB1Q9BRP7 624 aaPredicted RBP7.14□□□□□ -1.27
CLDN4-205ENST00000476494 COLEC11Q9BWP8 271 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 AGO4Q9HCK5 861 aaKnown RBP7.14□□□□□ -1.27
CLDN4-205ENST00000476494 RIC8AQ9NPQ8 531 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 NXF1Q9UBU9 619 aaKnown RBP7.14□□□□□ -1.27
CLDN4-205ENST00000476494 RCOR1Q9UKL0 485 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 KCNJ14Q9UNX9 436 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 PIN4Q9Y237 131 aaKnown RBP7.14□□□□□ -1.27
CLDN4-205ENST00000476494 MORC2Q9Y6X9 1032 aaPredicted RBP7.14□□□□□ -1.27
CLDN4-205ENST00000476494 POLQO75417 2590 aa7.14□□□□□ -1.27
CLDN4-205ENST00000476494 IGKV6-21A0A0C4DH24 114 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 hCG_1642624A0A1W2PR95 340 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 CLEC18AA5D8T8 446 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 GOLGA6L4A6NEF3 574 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 MEIS1O00470 390 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 TRDMT1O14717 391 aaKnown RBP7.13□□□□□ -1.27
CLDN4-205ENST00000476494 TERTO14746 1132 aaKnown RBP7.13□□□□□ -1.27
CLDN4-205ENST00000476494 SLC28A2O43868 658 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 OPHN1O60890 802 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 DTNBO60941 627 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 RNF40O75150 1001 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 PRPF40AO75400 957 aaKnown RBP7.13□□□□□ -1.27
CLDN4-205ENST00000476494 APBB3O95704 486 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 FOSP01100 380 aaPredicted RBP7.13□□□□□ -1.27
CLDN4-205ENST00000476494 TMOD1P28289 359 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 OR1D2P34982 312 aa7.13□□□□□ -1.27
CLDN4-205ENST00000476494 NASPP49321 788 aaPredicted RBP7.13□□□□□ -1.27
CLDN4-205ENST00000476494 DHPSP49366 369 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms