RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 CETN2P41208 172 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 NT5C2P49902 561 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 CYP4A11Q02928 519 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 CAMK2BQ13554 666 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 KRT28Q7Z3Y7 464 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 SATL1Q86VE3 508 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 ARHGAP24Q8N264 748 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 SKA1Q96BD8 255 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 DGCR14Q96DF8 476 aaKnown RBP11.15□□□□□ -0.62
ABCF1-205ENST00000475993 SPATA17Q96L03 361 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 EIF2AQ9BY44 585 aaKnown RBP11.15□□□□□ -0.62
ABCF1-205ENST00000475993 DRC3Q9H069 523 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 CPVLQ9H3G5 476 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 EBF3Q9H4W6 596 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 SENP1Q9P0U3 644 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 BTBD7Q9P203 1132 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 HEY2Q9UBP5 337 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 ANAPC5Q9UJX4 755 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 KDM3AQ9Y4C1 1321 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 FAM170AA1A519 330 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 CALUO43852 315 aaPredicted RBP11.15□□□□□ -0.62
ABCF1-205ENST00000475993 ADAMTS2O95450 1211 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 GAS8O95995 478 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 DLATP10515 647 aaKnown RBP11.15□□□□□ -0.62
ABCF1-205ENST00000475993 PGM1P36871 562 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 TUFMP49411 452 aaKnown RBP11.15□□□□□ -0.62
ABCF1-205ENST00000475993 CASP4P49662 377 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 TRIM67Q6ZTA4 783 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 KRT27Q7Z3Y8 459 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 TREML1Q86YW5 311 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.15□□□□□ -0.62
ABCF1-205ENST00000475993 C1orf54Q8WWF1 131 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 NACC2Q96BF6 587 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 SMC6Q96SB8 1091 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 CRNKL1Q9BZJ0 848 aaKnown RBP11.15□□□□□ -0.62
ABCF1-205ENST00000475993 RETREG1Q9H6L5 497 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 NDE1Q9NXR1 346 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 DCTN4Q9UJW0 460 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 NIP7Q9Y221 180 aaKnown RBP eCLIP11.15□□□□□ -0.62
ABCF1-205ENST00000475993 BUD23O43709 281 aaKnown RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 MTA2O94776 668 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 OR6B1O95007 311 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 CA4P22748 312 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 PSMC1P62191 440 aaKnown RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 PDE1BQ01064 536 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 MESDQ14696 234 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 KIF22Q14807 665 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 PKN2Q16513 984 aaKnown RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 MAPK6Q16659 721 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 SGO2Q562F6 1265 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 ARSHQ5FYA8 562 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 TMEM214Q6NUQ4 689 aaKnown RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 LRRC8BQ6P9F7 803 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 NET1Q7Z628 596 aaPredicted RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 HAS1Q92839 578 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 C9orf72Q96LT7 481 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 SLC7A5P2Q9GIP4 190 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 SEPT11Q9NVA2 429 aaKnown RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 CLIC5Q9NZA1 410 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 TMA7Q9Y2S6 64 aaKnown RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 ZNF862O60290 1169 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 OPHN1O60890 802 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 NR3C1P04150 777 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 ATF2P15336 505 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 CCR3P51677 355 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 TBL3Q12788 808 aaKnown RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 NKX1-1Q15270 411 aaPredicted RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 INAQ16352 499 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 DNAJC10Q8IXB1 793 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 SYT2Q8N9I0 419 aaPredicted RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 PRR11Q96HE9 360 aaPredicted RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 SH3GL1Q99961 368 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 OSBPL8Q9BZF1 889 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 ARHGEF4Q9NR80 690 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 SUGT1Q9Y2Z0 365 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 ADAMTSL3P82987 1691 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 MYPNQ86TC9 1320 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 EXOC1LA0A1B0GW35 172 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 USP17L3A6NCW0 530 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 USP17L4A6NCW7 530 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 VILLO15195 856 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 STK10O94804 968 aaKnown RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 TPPPO94811 219 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 FTLP02792 175 aaPredicted RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 ESRRAP11474 423 aaPredicted RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 AP2B1P63010 937 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 GPC5P78333 572 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 TRMT5Q32P41 509 aaKnown RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 EAPPQ56P03 285 aaPredicted RBP11.14□□□□□ -0.63
ABCF1-205ENST00000475993 FAM91A1Q658Y4 838 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 USP17L1Q7RTZ2 530 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 PDSS2Q86YH6 399 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 C4orf33Q8N1A6 199 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 ZNF276Q8N554 614 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 HSPBAP1Q96EW2 488 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 AGPAT1Q99943 283 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 TMEM47Q9BQJ4 181 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 KIAA1024Q9UPX6 916 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 MTMR7Q9Y216 660 aa11.14□□□□□ -0.63
ABCF1-205ENST00000475993 STK24Q9Y6E0 443 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms