RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 CCDC149Q6ZUS6 474 aa14.24□□□□□ -0.13
NIPAL3-206ENST00000475663 GRASPQ7Z6J2 395 aaPredicted RBP14.24□□□□□ -0.13
NIPAL3-206ENST00000475663 CMASQ8NFW8 434 aaPredicted RBP14.24□□□□□ -0.13
NIPAL3-206ENST00000475663 PRKD2Q9BZL6 878 aa14.24□□□□□ -0.13
NIPAL3-206ENST00000475663 HCFC1R1Q9NWW0 138 aa14.24□□□□□ -0.13
NIPAL3-206ENST00000475663 RAPGEFL1Q9UHV5 662 aa14.24□□□□□ -0.13
NIPAL3-206ENST00000475663 DERAQ9Y315 318 aa14.24□□□□□ -0.13
NIPAL3-206ENST00000475663 C2CD2Q9Y426 696 aa14.24□□□□□ -0.13
NIPAL3-206ENST00000475663 CLUHO75153 1309 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 H7C4K7 107 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 LDHAP00338 332 aaKnown RBP14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 RPN1P04843 607 aaKnown RBP14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 ITGB3P05106 788 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 CPB1P15086 417 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 GBP2P32456 591 aaPredicted RBP14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 YWHAHQ04917 246 aaPredicted RBP14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 SLC8B1Q6J4K2 584 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 ZNF280DQ6N043 979 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 ELMSAN1Q6PJG2 1045 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 RNF19BQ6ZMZ0 732 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 C15orf39Q6ZRI6 1047 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 GET4Q7L5D6 327 aaPredicted RBP14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 USP37Q86T82 979 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 C1orf127Q8N9H9 656 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 TDRD5Q8NAT2 981 aaKnown RBP14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 APPL2Q8NEU8 664 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 OR5B17Q8NGF7 314 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 HDAC7Q8WUI4 952 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 ERCC4Q92889 916 aaPredicted RBP14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 PGLYRP2Q96PD5 576 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 MYADMQ96S97 322 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 MTMR12Q9C0I1 747 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 ZDHHC7Q9NXF8 308 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 USP25Q9UHP3 1055 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 AGAP1Q9UPQ3 857 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 MAPK8IP1Q9UQF2 711 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 NR2E1Q9Y466 385 aa14.23□□□□□ -0.13
NIPAL3-206ENST00000475663 ZNF233A6NK53 670 aa14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 CYB561D2O14569 222 aa14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 PRRG1O14668 218 aa14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 KRT19P08727 400 aa14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 DLATP10515 647 aaKnown RBP14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 ADCY1Q08828 1119 aa14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 DPYDQ12882 1025 aa14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 BFSP1Q12934 665 aa14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 KNOP1Q1ED39 458 aaKnown RBP14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 WSCD1Q658N2 575 aa14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 CSGALNACT2Q8N6G5 542 aa14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 ZNF461Q8TAF7 563 aa14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 CCDC127Q96BQ5 260 aa14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 TSPAN18Q96SJ8 248 aa14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 CYP4F11Q9HBI6 524 aa14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 WDR6Q9NNW5 1121 aaKnown RBP14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 DPP7Q9UHL4 492 aa14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 SIX4Q9UIU6 781 aa14.22□□□□□ -0.13
NIPAL3-206ENST00000475663 GOLGA6L4A6NEF3 574 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 GADD45BO75293 160 aaPredicted RBP14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 ABLIM3O94929 683 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 VNN2O95498 520 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 TMEM191BP0C7N4 346 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 ALADP13716 330 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 ELF1P32519 619 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 CASP4P49662 377 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 TAF6P49848 677 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 PNOCQ13519 176 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 SNRNP35Q16560 246 aaKnown RBP14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 BMT2Q1RMZ1 405 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 TMEM31Q5JXX7 168 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 OVOS1Q6IE37 1185 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 HS2ST1Q7LGA3 356 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 SMYD4Q8IYR2 804 aaPredicted RBP14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 TTC9BQ8N6N2 239 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 OR10T2Q8NGX3 314 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 PLEKHO2Q8TD55 490 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 RSAD2Q8WXG1 361 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 BORCS6Q96GS4 357 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 LRFN3Q9BTN0 628 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 CRISPLD1Q9H336 500 aa14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 DNMT3BQ9UBC3 853 aaKnown RBP14.21□□□□□ -0.13
NIPAL3-206ENST00000475663 PDCD11Q14690 1871 aaKnown RBP14.21□□□□□ -0.14
NIPAL3-206ENST00000475663 UBE4BO95155 1302 aa14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 NRG2O14511 850 aaPredicted RBP14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 HCRTO43612 131 aa14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 EXOC3O60645 756 aa14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 SOAT2O75908 522 aa14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 OAZ2O95190 189 aa14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 ODC1P11926 461 aa14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 ATF2P15336 505 aa14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 TYMPP19971 482 aa14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 POU5F1Q01860 360 aaKnown RBP14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 CYP24A1Q07973 514 aa14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 OTOP3Q7RTS5 596 aa14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 FMR1NBQ8N0W7 255 aaPredicted RBP14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 XXYLT1Q8NBI6 393 aa14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 ATAD1Q8NBU5 361 aa14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 CXorf38Q8TB03 319 aa14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 ITFG1Q8TB96 612 aa14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 CACTINQ8WUQ7 758 aaKnown RBP14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 ING5Q8WYH8 240 aa14.2□□□□□ -0.14
NIPAL3-206ENST00000475663 ELMO3Q96BJ8 720 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms