RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 EPHA5P54756 1037 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 WNT7BP56706 349 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 LILRA4P59901 499 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 TWF1Q12792 350 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 MLF2Q15773 248 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-207ENST00000475549 SPATA1Q5VX52 437 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 JADE1Q6IE81 842 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 CRELD2Q6UXH1 353 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-207ENST00000475549 MTSS1LQ765P7 747 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 ZNF720Q7Z2F6 126 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 ADSSL1Q8N142 457 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 TTC9BQ8N6N2 239 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 ZSWIM2Q8NEG5 633 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 APPL2Q8NEU8 664 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 NKD2Q969F2 451 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-207ENST00000475549 RSPRY1Q96DX4 576 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 BICD1Q96G01 975 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 BORCS6Q96GS4 357 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 CDK5RAP3Q96JB5 506 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 CLIC6Q96NY7 704 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 LRRC3BQ96PB8 259 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 PGLYRP2Q96PD5 576 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 TMEM209Q96SK2 561 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 FGFBP2Q9BYJ0 223 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 CCSER1Q9C0I3 900 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 PARVGQ9HBI0 331 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 AFF4Q9UHB7 1163 aaKnown RBP7.64□□□□□ -1.19
HDAC3-207ENST00000475549 FBXO2Q9UK22 296 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-207ENST00000475549 SLC27A5Q9Y2P5 690 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-207ENST00000475549 STYXL1Q9Y6J8 313 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 ZNF292O60281 2723 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 A0A087X0B3 334 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 ANO9A1A5B4 782 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 FAM170BA6NMN3 283 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 K7ENM7 598 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 ARNTLO00327 626 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 OGTO15294 1046 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 PPP1R37O75864 691 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 SOAT2O75908 522 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 FAM13AO94988 1023 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 LRG1P02750 347 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 TARSP26639 723 aaKnown RBP7.63□□□□□ -1.19
HDAC3-207ENST00000475549 ELF1P32519 619 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 MATR3P43243 847 aaKnown RBP eCLIP7.63□□□□□ -1.19
HDAC3-207ENST00000475549 PRKCQQ04759 706 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 YWHAHQ04917 246 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-207ENST00000475549 PPP2R3AQ06190 1150 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 DUSP4Q13115 394 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 RESTQ13127 1097 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 GPR17Q13304 367 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 GRM2Q14416 872 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 TEAD2Q15562 447 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 STXBP5Q5T5C0 1151 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 C9orf57Q5W0N0 161 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 CENPPQ6IPU0 288 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 ZNF280DQ6N043 979 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 BRAPQ7Z569 592 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 LRRTM3Q86VH5 581 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 TMC8Q8IU68 726 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 GPIHBP1Q8IV16 184 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 MAP4K3Q8IVH8 894 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 ATAD1Q8NBU5 361 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 OR10T2Q8NGX3 314 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 LARP4BQ92615 738 aaKnown RBP7.63□□□□□ -1.19
HDAC3-207ENST00000475549 CLDN23Q96B33 292 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 ELSPBP1Q96BH3 223 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 DNAJC19Q96DA6 116 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 CALML4Q96GE6 196 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 SHDQ96IW2 340 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 ASB16Q96NS5 453 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 MKNK1Q9BUB5 465 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 MSTO1Q9BUK6 570 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 ST6GALNAC4Q9H4F1 302 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 ZHX3Q9H4I2 956 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 RPF1Q9H9Y2 349 aaKnown RBP7.63□□□□□ -1.19
HDAC3-207ENST00000475549 LTB4R2Q9NPC1 389 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 HEBP1Q9NRV9 189 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 MAFFQ9ULX9 164 aa7.63□□□□□ -1.19
HDAC3-207ENST00000475549 UBQLN1Q9UMX0 589 aaKnown RBP7.63□□□□□ -1.19
HDAC3-207ENST00000475549 RIF1Q5UIP0 2472 aaKnown RBP7.63□□□□□ -1.19
HDAC3-207ENST00000475549 PTPRZ1P23471 2315 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-207ENST00000475549 DMXL1Q9Y485 3027 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 GVINP1Q7Z2Y8 2422 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 VWA8A3KMH1 1905 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 MYMKA6NI61 221 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 H0YCG3 227 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 BMP15O95972 392 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 MYL4P12829 197 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 CPB1P15086 417 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 TYMPP19971 482 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 SYT1P21579 422 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 CASP5P51878 434 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 PFKPQ01813 784 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 CEBPZQ03701 1054 aaKnown RBP7.62□□□□□ -1.19
HDAC3-207ENST00000475549 UBXN2BQ14CS0 331 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 CYP4A22Q5TCH4 519 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 VITQ6UXI7 678 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 GAREM2Q75VX8 874 aa7.62□□□□□ -1.19
HDAC3-207ENST00000475549 PDZD4Q76G19 769 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms