RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 POMGNT1Q8WZA1 660 aa10.24□□□□□ -0.77
PDPN-204ENST00000475043 DHX58Q96C10 678 aa10.24□□□□□ -0.77
PDPN-204ENST00000475043 HVCN1Q96D96 273 aa10.24□□□□□ -0.77
PDPN-204ENST00000475043 DNAJC19Q96DA6 116 aa10.24□□□□□ -0.77
PDPN-204ENST00000475043 ASIC4Q96FT7 647 aa10.24□□□□□ -0.77
PDPN-204ENST00000475043 SUSD3Q96L08 255 aa10.24□□□□□ -0.77
PDPN-204ENST00000475043 RHOBTB2Q9BYZ6 727 aa10.24□□□□□ -0.77
PDPN-204ENST00000475043 IKZF4Q9H2S9 585 aa10.24□□□□□ -0.77
PDPN-204ENST00000475043 ST6GALNAC4Q9H4F1 302 aa10.24□□□□□ -0.77
PDPN-204ENST00000475043 KCNK12Q9HB15 430 aa10.24□□□□□ -0.77
PDPN-204ENST00000475043 PANK4Q9NVE7 773 aa10.24□□□□□ -0.77
PDPN-204ENST00000475043 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.24□□□□□ -0.77
PDPN-204ENST00000475043 CPSF3Q9UKF6 684 aaKnown RBP10.24□□□□□ -0.77
PDPN-204ENST00000475043 AGO2Q9UKV8 859 aaKnown RBP10.24□□□□□ -0.77
PDPN-204ENST00000475043 EXOC7Q9UPT5 735 aa10.24□□□□□ -0.77
PDPN-204ENST00000475043 KMT2EQ8IZD2 1858 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 CUTAO60888 179 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 CYP3A5P20815 502 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 FSHRP23945 695 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 LRPAP1P30533 357 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 HOXA9P31269 272 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 PLA2G5P39877 138 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 ME1P48163 572 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 NTHL1P78549 312 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 ROR1Q01973 937 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 KCNA1Q09470 495 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 PKP1Q13835 747 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 TMEM132DQ14C87 1099 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 POSTNQ15063 836 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 ZBTB6Q15916 424 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 UVSSAQ2YD98 709 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 SLC8B1Q6J4K2 584 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 ZNF280DQ6N043 979 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 DSTYKQ6XUX3 929 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 CD302Q8IX05 232 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 CCDC65Q8IXS2 484 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 SYCP3Q8IZU3 236 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 ANKK1Q8NFD2 765 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 BEST2Q8NFU1 509 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 NOC3LQ8WTT2 800 aaKnown RBP10.23□□□□□ -0.77
PDPN-204ENST00000475043 ACCSQ96QU6 501 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 MYADMQ96S97 322 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 TSPAN18Q96SJ8 248 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 LRRC27Q9C0I9 530 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 IGSF9Q9P2J2 1179 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 FBXL5Q9UKA1 691 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 TIMM13Q9Y5L4 95 aaPredicted RBP10.23□□□□□ -0.77
PDPN-204ENST00000475043 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.23□□□□□ -0.77
PDPN-204ENST00000475043 TECTAO75443 2155 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 TCHHQ07283 1943 aa10.23□□□□□ -0.77
PDPN-204ENST00000475043 TRIOO75962 3097 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 WDR27A2RRH5 827 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 PAPLNO95428 1278 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 PDGFBP01127 241 aaPredicted RBP10.22□□□□□ -0.77
PDPN-204ENST00000475043 LRG1P02750 347 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 NFICP08651 508 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 LAMP2P13473 410 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 CPB1P15086 417 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 ATF2P15336 505 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 CASP5P51878 434 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 AMPD3Q01432 767 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 YWHAHQ04917 246 aaPredicted RBP10.22□□□□□ -0.77
PDPN-204ENST00000475043 L1TD1Q5T7N2 865 aaKnown RBP10.22□□□□□ -0.77
PDPN-204ENST00000475043 SPATA1Q5VX52 437 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 SHC4Q6S5L8 630 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 USP37Q86T82 979 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 IQUBQ8NA54 791 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 ST13P5Q8NFI4 369 aaPredicted RBP10.22□□□□□ -0.77
PDPN-204ENST00000475043 KCNG4Q8TDN1 519 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 RSAD2Q8WXG1 361 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 FAM213AQ9BRX8 229 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 TNMDQ9H2S6 317 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 MFSD1Q9H3U5 465 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 CUEDC2Q9H467 287 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 ASB7Q9H672 318 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 CYP4F11Q9HBI6 524 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 OLFML3Q9NRN5 406 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 HCFC1R1Q9NWW0 138 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 FBXL21Q9UKT6 434 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 CFAP45Q9UL16 551 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 STYXL1Q9Y6J8 313 aa10.22□□□□□ -0.77
PDPN-204ENST00000475043 DOCK6Q96HP0 2047 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 FRMD3A2A2Y4 597 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 M0QZQ0 153 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 PPEF2O14830 753 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 POLR2DO15514 142 aaKnown RBP10.21□□□□□ -0.77
PDPN-204ENST00000475043 MAP3K7O43318 606 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 TBC1D4O60343 1298 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 PRPF6O94906 941 aaKnown RBP10.21□□□□□ -0.77
PDPN-204ENST00000475043 ABLIM3O94929 683 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 ADRB2P07550 413 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 ADSSP30520 456 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 VCPP55072 806 aaKnown RBP10.21□□□□□ -0.77
PDPN-204ENST00000475043 LILRA4P59901 499 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 ASIC1P78348 528 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 DNM1Q05193 864 aaKnown RBP10.21□□□□□ -0.77
PDPN-204ENST00000475043 ADCY1Q08828 1119 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 ALCAMQ13740 583 aa10.21□□□□□ -0.77
PDPN-204ENST00000475043 MRPL58Q14197 206 aaKnown RBP10.21□□□□□ -0.77
PDPN-204ENST00000475043 PABPC1LQ4VXU2 614 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms