RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 FBXL21Q9UKT6 434 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 EXOC7Q9UPT5 735 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 BACE2Q9Y5Z0 518 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 DENND4AQ7Z401 1863 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 KRBA1A5PL33 1030 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 ANHXE9PGG2 379 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 STK25O00506 426 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 GALR2O43603 387 aaPredicted RBP12.87□□□□□ -0.35
CLIP2-204ENST00000474962 HNRNPA1P09651 372 aaKnown RBP eCLIP12.87□□□□□ -0.35
CLIP2-204ENST00000474962 RPL9P32969 192 aaKnown RBP12.87□□□□□ -0.35
CLIP2-204ENST00000474962 MATR3P43243 847 aaKnown RBP eCLIP12.87□□□□□ -0.35
CLIP2-204ENST00000474962 ARPP19P56211 112 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 MCL1Q07820 350 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 PSMD2Q13200 908 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 PNOCQ13519 176 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 NOLC1Q14978 699 aaKnown RBP eCLIP12.87□□□□□ -0.35
CLIP2-204ENST00000474962 UVSSAQ2YD98 709 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 FAM26FQ5R3K3 315 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 VARS2Q5ST30 1063 aaKnown RBP12.87□□□□□ -0.35
CLIP2-204ENST00000474962 PARM1Q6UWI2 310 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 ZPBP2Q6X784 338 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 ANKS3Q6ZW76 656 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 ZNF720Q7Z2F6 126 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 ELOA2Q8IYF1 753 aaPredicted RBP12.87□□□□□ -0.35
CLIP2-204ENST00000474962 SYCP3Q8IZU3 236 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 ITFG1Q8TB96 612 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 OLFML3Q9NRN5 406 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 DNMT3BQ9UBC3 853 aaKnown RBP12.87□□□□□ -0.35
CLIP2-204ENST00000474962 TBX20Q9UMR3 447 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 VWA8A3KMH1 1905 aa12.87□□□□□ -0.35
CLIP2-204ENST00000474962 DOCK8Q8NF50 2099 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 FRMD3A2A2Y4 597 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 LACTBL1A8MY62 500 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 TBC1D4O60343 1298 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 KIF20AO95235 890 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 CXCL8P10145 99 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 TNFSF9P41273 254 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 DPYDQ12882 1025 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 HTR4Q13639 388 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 MRPL58Q14197 206 aaKnown RBP12.86□□□□□ -0.35
CLIP2-204ENST00000474962 CAMK4Q16566 473 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 KMT5BQ4FZB7 885 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 ZBTB41Q5SVQ8 909 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 CWF19L1Q69YN2 538 aaKnown RBP12.86□□□□□ -0.35
CLIP2-204ENST00000474962 ZNF461Q8TAF7 563 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 FGF13Q92913 245 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 FGF14Q92915 247 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 NXPE3Q969Y0 559 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 HVCN1Q96D96 273 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 ACCSQ96QU6 501 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 GTPBP4Q9BZE4 634 aaKnown RBP12.86□□□□□ -0.35
CLIP2-204ENST00000474962 NUP62CLQ9H1M0 184 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 WNT16Q9UBV4 365 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 TUBGCP4Q9UGJ1 667 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 CA14Q9ULX7 337 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 NUB1Q9Y5A7 615 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 NUMBLQ9Y6R0 609 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 KMT2EQ8IZD2 1858 aa12.86□□□□□ -0.35
CLIP2-204ENST00000474962 TTC26A0AVF1 554 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 HNRNPDLO14979 420 aaKnown RBP12.85□□□□□ -0.35
CLIP2-204ENST00000474962 XYLBO75191 536 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 ABLIM3O94929 683 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 SEC24AO95486 1093 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 CLTAP09496 248 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 SRFP11831 508 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 HOXA9P31269 272 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 LIG4P49917 911 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 NUBP1P53384 320 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 GTF2BQ00403 316 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 ZBTB6Q15916 424 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 ZC2HC1CQ53FD0 456 aaPredicted RBP12.85□□□□□ -0.35
CLIP2-204ENST00000474962 L1TD1Q5T7N2 865 aaKnown RBP12.85□□□□□ -0.35
CLIP2-204ENST00000474962 SLC8B1Q6J4K2 584 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 POTEHQ6S545 545 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 GPR152Q8TDT2 470 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 GSDMAQ96QA5 445 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 ST6GALNAC4Q9H4F1 302 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 TMEM206Q9H813 350 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 SLC39A2Q9NP94 309 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 FBXL5Q9UKA1 691 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 CDH7Q9ULB5 785 aa12.85□□□□□ -0.35
CLIP2-204ENST00000474962 WDR27A2RRH5 827 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 SYN3O14994 580 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 EIF3DO15371 548 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLIP2-204ENST00000474962 RHOBTB3O94955 611 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 AOC1P19801 751 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 GUCY2FP51841 1108 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 GPC5P78333 572 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 ROR1Q01973 937 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 KCNB1Q14721 858 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 PABPC1LQ4VXU2 614 aaKnown RBP12.84□□□□□ -0.35
CLIP2-204ENST00000474962 SLC39A4Q6P5W5 647 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 ING5Q8WYH8 240 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 HPS3Q969F9 1004 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 SYAP1Q96A49 352 aaPredicted RBP12.84□□□□□ -0.35
CLIP2-204ENST00000474962 KIF12Q96FN5 646 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 SUSD3Q96L08 255 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 FIZ1Q96SL8 496 aa12.84□□□□□ -0.35
CLIP2-204ENST00000474962 CLSTN2Q9H4D0 955 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms