RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 MTRRQ9UBK8 725 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 RWDD2AQ9UIY3 292 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 COG5Q9UP83 839 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.27■□□□□ 0.52
SCAF11-206ENST00000474828 TEX28O15482 410 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 GLP2RO95838 553 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 ITGB3P05106 788 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 TMEM191BP0C7N4 346 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 PTMSP20962 102 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 TKTP29401 623 aaKnown RBP18.27■□□□□ 0.52
SCAF11-206ENST00000474828 NRIP1P48552 1158 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 TAF6P49848 677 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 DLG4P78352 724 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 RBP5P82980 135 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 BFSP1Q12934 665 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 KLHL40Q2TBA0 621 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 ZACNQ401N2 412 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 CCDC183Q5T5S1 534 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 CEP135Q66GS9 1140 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 SLC8B1Q6J4K2 584 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 LILRA6Q6PI73 481 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 ANKS3Q6ZW76 656 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 USP37Q86T82 979 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 PPFIBP1Q86W92 1011 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 FAM84AQ96KN4 292 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 B3GALT6Q96L58 329 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 CLSTN3Q9BQT9 956 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 EMILIN2Q9BXX0 1053 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 OXCT2Q9BYC2 517 aaPredicted RBP18.27■□□□□ 0.52
SCAF11-206ENST00000474828 XYLT2Q9H1B5 865 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 TMEM63CQ9P1W3 806 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 NUB1Q9Y5A7 615 aa18.27■□□□□ 0.52
SCAF11-206ENST00000474828 KPNA7A9QM74 516 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 I3L4J1 428 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 TNNC2P02585 160 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 DLATP10515 647 aaKnown RBP18.26■□□□□ 0.51
SCAF11-206ENST00000474828 TNNI1P19237 187 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 ERCC5P28715 1186 aaPredicted RBP18.26■□□□□ 0.51
SCAF11-206ENST00000474828 POLR2BP30876 1174 aaKnown RBP18.26■□□□□ 0.51
SCAF11-206ENST00000474828 GTF2H1P32780 548 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 GTF2F1P35269 517 aaKnown RBP eCLIP18.26■□□□□ 0.51
SCAF11-206ENST00000474828 NDUFV1P49821 464 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 CLCN4P51793 760 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 VAMP7P51809 220 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 CCDC85BQ15834 202 aaPredicted RBP18.26■□□□□ 0.51
SCAF11-206ENST00000474828 DPCR1Q3MIW9 517 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 CSGALNACT2Q8N6G5 542 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 APPL2Q8NEU8 664 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 SPATA18Q8TC71 538 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 RIN2Q8WYP3 895 aaPredicted RBP18.26■□□□□ 0.51
SCAF11-206ENST00000474828 MSLNLQ96KJ4 702 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 SENP8Q96LD8 212 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 ZNF560Q96MR9 790 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 AGAP1Q9UPQ3 857 aa18.26■□□□□ 0.51
SCAF11-206ENST00000474828 ARHGEF37A1IGU5 675 aa18.25■□□□□ 0.51
SCAF11-206ENST00000474828 CST3P01034 146 aaPredicted RBP18.25■□□□□ 0.51
SCAF11-206ENST00000474828 FAM163BP0C2L3 166 aa18.25■□□□□ 0.51
SCAF11-206ENST00000474828 RAB33AQ14088 237 aa18.25■□□□□ 0.51
SCAF11-206ENST00000474828 PSMD5Q16401 504 aa18.25■□□□□ 0.51
SCAF11-206ENST00000474828 SV2CQ496J9 727 aa18.25■□□□□ 0.51
SCAF11-206ENST00000474828 VARS2Q5ST30 1063 aaKnown RBP18.25■□□□□ 0.51
SCAF11-206ENST00000474828 TDRD10Q5VZ19 366 aaKnown RBP18.25■□□□□ 0.51
SCAF11-206ENST00000474828 LMBRD2Q68DH5 695 aaPredicted RBP18.25■□□□□ 0.51
SCAF11-206ENST00000474828 KIAA1841Q6NSI8 718 aa18.25■□□□□ 0.51
SCAF11-206ENST00000474828 PRSS55Q6UWB4 352 aaPredicted RBP18.25■□□□□ 0.51
SCAF11-206ENST00000474828 RSPO2Q6UXX9 243 aaPredicted RBP18.25■□□□□ 0.51
SCAF11-206ENST00000474828 DPH6Q7L8W6 267 aa18.25■□□□□ 0.51
SCAF11-206ENST00000474828 FRMD5Q7Z6J6 570 aa18.25■□□□□ 0.51
SCAF11-206ENST00000474828 NOC3LQ8WTT2 800 aaKnown RBP18.25■□□□□ 0.51
SCAF11-206ENST00000474828 HDAC7Q8WUI4 952 aa18.25■□□□□ 0.51
SCAF11-206ENST00000474828 UBE2ZQ9H832 354 aaPredicted RBP18.25■□□□□ 0.51
SCAF11-206ENST00000474828 CLEC1BQ9P126 229 aa18.25■□□□□ 0.51
SCAF11-206ENST00000474828 HCFC2Q9Y5Z7 792 aa18.25■□□□□ 0.51
SCAF11-206ENST00000474828 SCN1AP35498 2009 aa18.25■□□□□ 0.51
SCAF11-206ENST00000474828 PER2O15055 1255 aa18.24■□□□□ 0.51
SCAF11-206ENST00000474828 PMM2O15305 246 aa18.24■□□□□ 0.51
SCAF11-206ENST00000474828 VNN1O95497 513 aa18.24■□□□□ 0.51
SCAF11-206ENST00000474828 ADH1AP07327 375 aa18.24■□□□□ 0.51
SCAF11-206ENST00000474828 EPB41P11171 864 aaKnown RBP18.24■□□□□ 0.51
SCAF11-206ENST00000474828 ATICP31939 592 aa18.24■□□□□ 0.51
SCAF11-206ENST00000474828 PPP3CAQ08209 521 aa18.24■□□□□ 0.51
SCAF11-206ENST00000474828 SV2AQ7L0J3 742 aa18.24■□□□□ 0.51
SCAF11-206ENST00000474828 MICALL1Q8N3F8 863 aa18.24■□□□□ 0.51
SCAF11-206ENST00000474828 HLA-CQ95604 372 aa18.24■□□□□ 0.51
SCAF11-206ENST00000474828 RHOBTB2Q9BYZ6 727 aa18.24■□□□□ 0.51
SCAF11-206ENST00000474828 METTL14Q9HCE5 456 aaKnown RBP18.24■□□□□ 0.51
SCAF11-206ENST00000474828 DSEQ9UL01 958 aa18.24■□□□□ 0.51
SCAF11-206ENST00000474828 CTNND2Q9UQB3 1225 aa18.24■□□□□ 0.51
SCAF11-206ENST00000474828 TSC2P49815 1807 aa18.23■□□□□ 0.51
SCAF11-206ENST00000474828 H7C4K7 107 aa18.23■□□□□ 0.51
SCAF11-206ENST00000474828 LINC01565O15544 149 aa18.23■□□□□ 0.51
SCAF11-206ENST00000474828 TBX10O75333 385 aa18.23■□□□□ 0.51
SCAF11-206ENST00000474828 ABLIM3O94929 683 aa18.23■□□□□ 0.51
SCAF11-206ENST00000474828 GNA14O95837 355 aa18.23■□□□□ 0.51
SCAF11-206ENST00000474828 ODC1P11926 461 aa18.23■□□□□ 0.51
SCAF11-206ENST00000474828 KLHL10Q6JEL2 608 aa18.23■□□□□ 0.51
SCAF11-206ENST00000474828 RTL10Q7L3V2 364 aa18.23■□□□□ 0.51
SCAF11-206ENST00000474828 RBM23Q86U06 439 aaKnown RBP18.23■□□□□ 0.51
SCAF11-206ENST00000474828 IRF2BP1Q8IU81 584 aa18.23■□□□□ 0.51
SCAF11-206ENST00000474828 TOP6BLQ8N6T0 577 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms