RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 NR2E1Q9Y466 385 aa22.54■■□□□ 1.2
SH3D21-202ENST00000474766 SLC16A4O15374 487 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 PEX3P56589 373 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 SARNPP82979 210 aaKnown RBP22.53■■□□□ 1.2
SH3D21-202ENST00000474766 DCAF12L1Q5VU92 463 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 XRRA1Q6P2D8 792 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 RNF207Q6ZRF8 634 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 FBXO25Q8TCJ0 367 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 SH2D3AQ9BRG2 576 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 GPRC5CQ9NQ84 441 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 GRHL1Q9NZI5 618 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 ARL2BPQ9Y2Y0 163 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 ZNF236Q9UL36 1845 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 RASGRF2O14827 1237 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 MYCLP12524 364 aaPredicted RBP22.53■■□□□ 1.2
SH3D21-202ENST00000474766 RARGP13631 454 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 HOXD10P28358 340 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 ATP11AP98196 1134 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 TNS4Q8IZW8 715 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 RDM1Q8NG50 284 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 RXFP1Q9HBX9 757 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 PCYOX1Q9UHG3 505 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 COG5Q9UP83 839 aa22.53■■□□□ 1.2
SH3D21-202ENST00000474766 PHF2O75151 1096 aa22.52■■□□□ 1.2
SH3D21-202ENST00000474766 ATP2A2P16615 1042 aaKnown RBP22.52■■□□□ 1.2
SH3D21-202ENST00000474766 PTGIRP43119 386 aa22.52■■□□□ 1.2
SH3D21-202ENST00000474766 MSH2P43246 934 aa22.52■■□□□ 1.2
SH3D21-202ENST00000474766 AUHQ13825 339 aaKnown RBP22.52■■□□□ 1.2
SH3D21-202ENST00000474766 MORN1Q5T089 497 aa22.52■■□□□ 1.2
SH3D21-202ENST00000474766 APLFQ8IW19 511 aaPredicted RBP22.52■■□□□ 1.2
SH3D21-202ENST00000474766 RHOT2Q8IXI1 618 aa22.52■■□□□ 1.2
SH3D21-202ENST00000474766 SLC20A1Q8WUM9 679 aa22.52■■□□□ 1.2
SH3D21-202ENST00000474766 TMEM117Q9H0C3 514 aa22.52■■□□□ 1.2
SH3D21-202ENST00000474766 A6NHS1 94 aa22.52■■□□□ 1.19
SH3D21-202ENST00000474766 RIPK2O43353 540 aa22.52■■□□□ 1.19
SH3D21-202ENST00000474766 GGPS1O95749 300 aa22.52■■□□□ 1.19
SH3D21-202ENST00000474766 SLC25A27O95847 323 aa22.52■■□□□ 1.19
SH3D21-202ENST00000474766 ADSSP30520 456 aa22.52■■□□□ 1.19
SH3D21-202ENST00000474766 XKR9Q5GH70 373 aa22.52■■□□□ 1.19
SH3D21-202ENST00000474766 TMEM161BQ8NDZ6 487 aa22.52■■□□□ 1.19
SH3D21-202ENST00000474766 SENP7Q9BQF6 1050 aa22.52■■□□□ 1.19
SH3D21-202ENST00000474766 MROH8Q9H579 483 aa22.52■■□□□ 1.19
SH3D21-202ENST00000474766 RNF146Q9NTX7 359 aa22.52■■□□□ 1.19
SH3D21-202ENST00000474766 SNX24Q9Y343 169 aa22.52■■□□□ 1.19
SH3D21-202ENST00000474766 SYNGAP1Q96PV0 1343 aa22.51■■□□□ 1.19
SH3D21-202ENST00000474766 SKAP2O75563 359 aaPredicted RBP22.51■■□□□ 1.19
SH3D21-202ENST00000474766 ADRB2P07550 413 aa22.51■■□□□ 1.19
SH3D21-202ENST00000474766 ATP5DP30049 168 aa22.51■■□□□ 1.19
SH3D21-202ENST00000474766 MXI1P50539 228 aa22.51■■□□□ 1.19
SH3D21-202ENST00000474766 PRMT2P55345 433 aa22.51■■□□□ 1.19
SH3D21-202ENST00000474766 CCDC15Q0P6D6 951 aa22.51■■□□□ 1.19
SH3D21-202ENST00000474766 ARHGEF16Q5VV41 709 aa22.51■■□□□ 1.19
SH3D21-202ENST00000474766 MAP4K3Q8IVH8 894 aa22.51■■□□□ 1.19
SH3D21-202ENST00000474766 USP6NLQ92738 828 aa22.51■■□□□ 1.19
SH3D21-202ENST00000474766 TRIM7Q9C029 511 aa22.51■■□□□ 1.19
SH3D21-202ENST00000474766 TBX20Q9UMR3 447 aa22.51■■□□□ 1.19
SH3D21-202ENST00000474766 EXOC7Q9UPT5 735 aa22.51■■□□□ 1.19
SH3D21-202ENST00000474766 E7ENQ6 273 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 ABLIM1O14639 778 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 KRT16P08779 473 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 CCNB1P14635 433 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 GRB14Q14449 540 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 CMPK2Q5EBM0 449 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 ANKRD20A2Q5SQ80 823 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 FAM102BQ5T8I3 360 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 ANKRD20A1Q5TYW2 823 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 ANKRD20A3Q5VUR7 823 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 PLA2G4FQ68DD2 849 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 ZNF746Q6NUN9 644 aaPredicted RBP22.5■■□□□ 1.19
SH3D21-202ENST00000474766 ANO5Q75V66 913 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 VSIG10LQ86VR7 867 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 FAM71AQ8IYT1 594 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 NTPCRQ9BSD7 190 aaKnown RBP22.5■■□□□ 1.19
SH3D21-202ENST00000474766 SEMA4AQ9H3S1 761 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 SEPT11Q9NVA2 429 aaKnown RBP22.5■■□□□ 1.19
SH3D21-202ENST00000474766 PRKAG3Q9UGI9 489 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 BRCA2P51587 3418 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 TRMT10CQ7L0Y3 403 aaKnown RBP22.5■■□□□ 1.19
SH3D21-202ENST00000474766 CHST13Q8NET6 341 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 RAET1EQ8TD07 263 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 MICAL1Q8TDZ2 1067 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 GLG1Q92896 1179 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 GPRASP2Q96D09 838 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 RAB3IPQ96QF0 476 aaPredicted RBP22.5■■□□□ 1.19
SH3D21-202ENST00000474766 ERVK-5Q9HDB9 667 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 IVNS1ABPQ9Y6Y0 642 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 PFASO15067 1338 aa22.5■■□□□ 1.19
SH3D21-202ENST00000474766 SLC15A5A6NIM6 579 aa22.49■■□□□ 1.19
SH3D21-202ENST00000474766 MIF4GDA9UHW6 222 aaKnown RBP22.49■■□□□ 1.19
SH3D21-202ENST00000474766 ANKRD63C9JTQ0 380 aa22.49■■□□□ 1.19
SH3D21-202ENST00000474766 FTLP02792 175 aaPredicted RBP22.49■■□□□ 1.19
SH3D21-202ENST00000474766 NPTX2P47972 431 aa22.49■■□□□ 1.19
SH3D21-202ENST00000474766 IFNAR2P48551 515 aa22.49■■□□□ 1.19
SH3D21-202ENST00000474766 SNRNP35Q16560 246 aaKnown RBP22.49■■□□□ 1.19
SH3D21-202ENST00000474766 C11orf63Q6NUN7 778 aa22.49■■□□□ 1.19
SH3D21-202ENST00000474766 NSMFQ6X4W1 530 aa22.49■■□□□ 1.19
SH3D21-202ENST00000474766 EPS8L3Q8TE67 593 aaKnown RBP22.49■■□□□ 1.19
SH3D21-202ENST00000474766 SOCS4Q8WXH5 440 aa22.49■■□□□ 1.19
SH3D21-202ENST00000474766 KIF9Q9HAQ2 790 aa22.49■■□□□ 1.19
SH3D21-202ENST00000474766 ADAM22Q9P0K1 906 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms