RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CTNND1O60716 968 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 ITGB1P05556 798 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 TYRP14679 529 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 MAP2K6P52564 334 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 C21orf58P58505 322 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 RNASE9P60153 205 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 FLYWCH1Q4VC44 716 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 HSP90AB2PQ58FF8 381 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 EMC10Q5UCC4 262 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 LRRC55Q6ZSA7 311 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 UBE3BQ7Z3V4 1068 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 SRGAP1Q7Z6B7 1085 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 DAAM2Q86T65 1068 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 TPH2Q8IWU9 490 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 OR56A1Q8NGH5 318 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 GPR150Q8NGU9 434 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 SCAMP4Q969E2 229 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 RUNDC1Q96C34 613 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 DMRTA2Q96SC8 542 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 BRD9Q9H8M2 597 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 ADARB2Q9NS39 739 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 KLHL11Q9NVR0 708 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 PNPOQ9NVS9 261 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 ABCF2Q9UG63 623 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 FZD1Q9UP38 647 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 USP15Q9Y4E8 981 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 NOX1Q9Y5S8 564 aa4.18□□□□□ -1.74
ECHDC1-213ENST00000474240 A0A1B0GTW7 788 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 TCRBV7S2A1N4TA0A589 114 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 CDHR4A6H8M9 788 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 NT5C1B-RDH14C9J2C7 533 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 F2RL2O00254 374 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 KIF3BO15066 747 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 RPS6KA4O75676 772 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 SOAT2O75908 522 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 CFIP05156 583 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 PROZP22891 400 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 PRDX5P30044 214 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 CACNB3P54284 484 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 ZNF280AP59817 542 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 POU6F2P78424 691 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 TAP1Q03518 808 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 ZNF844Q08AG5 666 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 SNAPC2Q13487 334 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 FGL2Q14314 439 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 ANO6Q4KMQ2 910 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 TIGD2Q4W5G0 525 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 CCDC93Q567U6 631 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 LY6G5CQ5SRR4 150 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 B3GNT9Q6UX72 402 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 FAM90A1Q86YD7 464 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 SYT12Q8IV01 421 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 MAPKAPK5Q8IW41 473 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 COLGALT2Q8IYK4 626 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 DCBLD1Q8N8Z6 715 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 KLHDC4Q8TBB5 520 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 TBC1D15Q8TC07 691 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 SLC35A4Q96G79 324 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 BOD1Q96IK1 185 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 PHACTR3Q96KR7 559 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 C8orf48Q96LL4 319 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 LRGUKQ96M69 825 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 CGRRF1Q99675 332 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 VRK1Q99986 396 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 TMEM60Q9H2L4 133 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 GSTO2Q9H4Y5 243 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 AKIP1Q9NQ31 210 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 FBXO34Q9NWN3 711 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 NR2E3Q9Y5X4 410 aa4.17□□□□□ -1.74
ECHDC1-213ENST00000474240 A0A088AWK7 358 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 MYADML2A6NDP7 307 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 MARCH11A6NNE9 402 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 E7ENX8 843 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 H3BUI4 141 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 LEFTY2O00292 366 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 B3GALT2O43825 422 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 TUSC2O75896 110 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 UBXN7O94888 489 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 GPANK1O95872 356 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 HRGP04196 525 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 RARBP10826 455 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 ZNF37AP17032 561 aaPredicted RBP4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 ATF3P18847 181 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 DDX6P26196 483 aaKnown RBP eCLIP4.16□□□□□ -1.742e-7■■■□□ 18.3
ECHDC1-213ENST00000474240 HTR1BP28222 390 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 NKX6-1P78426 367 aaPredicted RBP4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 TAP2Q03519 686 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 HABP2Q14520 560 aaPredicted RBP4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 GBX1Q14549 363 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 ZNF267Q14586 743 aaPredicted RBP4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 KIF22Q14807 665 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 BEAN1Q3B7T3 259 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 ARHGAP29Q52LW3 1261 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 CCDC181Q5TID7 509 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 TSHZ3Q63HK5 1081 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 KCNV1Q6PIU1 500 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 PRIMA1Q86XR5 153 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 FMNL3Q8IVF7 1028 aa4.16□□□□□ -1.74
ECHDC1-213ENST00000474240 RAB24Q969Q5 203 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms