RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 FAM26FQ5R3K3 315 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 ARMCX5Q6P1M9 558 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 UNC13DQ70J99 1090 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 BMP8AQ7Z5Y6 402 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 BRSK2Q8IWQ3 736 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 GRAMD1CQ8IYS0 662 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 LEO1Q8WVC0 666 aaPredicted RBP19.43■□□□□ 0.7
UPF3A-203ENST00000474056 KCNK12Q9HB15 430 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 HCFC1R1Q9NWW0 138 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 EPS15L1Q9UBC2 864 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 SERTAD1Q9UHV2 236 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 KCNH3Q9ULD8 1083 aa19.43■□□□□ 0.7
UPF3A-203ENST00000474056 IL18RAPO95256 599 aa19.42■□□□□ 0.7
UPF3A-203ENST00000474056 SEC24AO95486 1093 aa19.42■□□□□ 0.7
UPF3A-203ENST00000474056 LDHAP00338 332 aaKnown RBP19.42■□□□□ 0.7
UPF3A-203ENST00000474056 POU2F2P09086 479 aa19.42■□□□□ 0.7
UPF3A-203ENST00000474056 ATF2P15336 505 aa19.42■□□□□ 0.7
UPF3A-203ENST00000474056 HOXD13P35453 343 aa19.42■□□□□ 0.7
UPF3A-203ENST00000474056 AFMP43652 599 aa19.42■□□□□ 0.7
UPF3A-203ENST00000474056 EHHADHQ08426 723 aa19.42■□□□□ 0.7
UPF3A-203ENST00000474056 CUL4BQ13620 913 aa19.42■□□□□ 0.7
UPF3A-203ENST00000474056 STXBP4Q6ZWJ1 553 aa19.42■□□□□ 0.7
UPF3A-203ENST00000474056 UBALD2Q8IYN6 164 aa19.42■□□□□ 0.7
UPF3A-203ENST00000474056 NOC3LQ8WTT2 800 aaKnown RBP19.42■□□□□ 0.7
UPF3A-203ENST00000474056 PBXIP1Q96AQ6 731 aa19.42■□□□□ 0.7
UPF3A-203ENST00000474056 SPATA32Q96LK8 384 aa19.42■□□□□ 0.7
UPF3A-203ENST00000474056 DPP3Q9NY33 737 aa19.42■□□□□ 0.7
UPF3A-203ENST00000474056 DNMT3BQ9UBC3 853 aaKnown RBP19.42■□□□□ 0.7
UPF3A-203ENST00000474056 A0A1B0GVL5 298 aa19.41■□□□□ 0.7
UPF3A-203ENST00000474056 EIF3DO15371 548 aaKnown RBP eCLIP19.41■□□□□ 0.7
UPF3A-203ENST00000474056 ACTN4O43707 911 aaKnown RBP19.41■□□□□ 0.7
UPF3A-203ENST00000474056 CPB1P15086 417 aa19.41■□□□□ 0.7
UPF3A-203ENST00000474056 TYMPP19971 482 aa19.41■□□□□ 0.7
UPF3A-203ENST00000474056 FSHRP23945 695 aa19.41■□□□□ 0.7
UPF3A-203ENST00000474056 ELF1P32519 619 aa19.41■□□□□ 0.7
UPF3A-203ENST00000474056 RTL10Q7L3V2 364 aa19.41■□□□□ 0.7
UPF3A-203ENST00000474056 EPM2AIP1Q7L775 607 aaPredicted RBP19.41■□□□□ 0.7
UPF3A-203ENST00000474056 RSAD2Q8WXG1 361 aa19.41■□□□□ 0.7
UPF3A-203ENST00000474056 FAM84AQ96KN4 292 aa19.41■□□□□ 0.7
UPF3A-203ENST00000474056 SENP8Q96LD8 212 aa19.41■□□□□ 0.7
UPF3A-203ENST00000474056 CYP4F11Q9HBI6 524 aa19.41■□□□□ 0.7
UPF3A-203ENST00000474056 RBAKQ9NYW8 714 aaPredicted RBP19.41■□□□□ 0.7
UPF3A-203ENST00000474056 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.41■□□□□ 0.7
UPF3A-203ENST00000474056 MUC6Q6W4X9 2439 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 ARHGEF37A1IGU5 675 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 TULP1O00294 542 aaPredicted RBP19.4■□□□□ 0.7
UPF3A-203ENST00000474056 PRRG1O14668 218 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 EXTL3O43909 919 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 OAZ2O95190 189 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 PDGFBP01127 241 aaPredicted RBP19.4■□□□□ 0.7
UPF3A-203ENST00000474056 LRG1P02750 347 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 OR4Q2P0C623 313 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 ODC1P11926 461 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 PFKFB1P16118 471 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 ADCY1Q08828 1119 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 TPGS2Q68CL5 300 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 RNF19BQ6ZMZ0 732 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 USP37Q86T82 979 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 NT5DC4Q86YG4 428 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 TCEAL8Q8IYN2 117 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 CEP57L1Q8IYX8 460 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 GPD1LQ8N335 351 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 ST13P5Q8NFI4 369 aaPredicted RBP19.4■□□□□ 0.7
UPF3A-203ENST00000474056 ZNF507Q8TCN5 953 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 MFSD14AQ96MC6 490 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 PYM1Q9BRP8 204 aaKnown RBP19.4■□□□□ 0.7
UPF3A-203ENST00000474056 IGSF9Q9P2J2 1179 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 AFF4Q9UHB7 1163 aaKnown RBP19.4■□□□□ 0.7
UPF3A-203ENST00000474056 INSL5Q9Y5Q6 135 aa19.4■□□□□ 0.7
UPF3A-203ENST00000474056 SLFN14P0C7P3 912 aa19.39■□□□□ 0.69
UPF3A-203ENST00000474056 LAMP2P13473 410 aa19.39■□□□□ 0.69
UPF3A-203ENST00000474056 CMA1P23946 247 aa19.39■□□□□ 0.69
UPF3A-203ENST00000474056 TAF6P49848 677 aa19.39■□□□□ 0.69
UPF3A-203ENST00000474056 TFAMQ00059 246 aaKnown RBP19.39■□□□□ 0.69
UPF3A-203ENST00000474056 TDGQ13569 410 aa19.39■□□□□ 0.69
UPF3A-203ENST00000474056 PABPC1LQ4VXU2 614 aaKnown RBP19.39■□□□□ 0.69
UPF3A-203ENST00000474056 OVOS1Q6IE37 1185 aa19.39■□□□□ 0.69
UPF3A-203ENST00000474056 NELFCDQ8IXH7 590 aa19.39■□□□□ 0.69
UPF3A-203ENST00000474056 ITFG1Q8TB96 612 aa19.39■□□□□ 0.69
UPF3A-203ENST00000474056 TMEM209Q96SK2 561 aa19.39■□□□□ 0.69
UPF3A-203ENST00000474056 PDE11AQ9HCR9 933 aa19.39■□□□□ 0.69
UPF3A-203ENST00000474056 DUSP12Q9UNI6 340 aa19.39■□□□□ 0.69
UPF3A-203ENST00000474056 HPSEQ9Y251 543 aa19.39■□□□□ 0.69
UPF3A-203ENST00000474056 PVALEFA0A1B0GWK0 134 aa19.38■□□□□ 0.69
UPF3A-203ENST00000474056 NARSO43776 548 aaKnown RBP19.38■□□□□ 0.69
UPF3A-203ENST00000474056 KLRC4O43908 158 aa19.38■□□□□ 0.69
UPF3A-203ENST00000474056 UBE4BO95155 1302 aa19.38■□□□□ 0.69
UPF3A-203ENST00000474056 VNN2O95498 520 aa19.38■□□□□ 0.69
UPF3A-203ENST00000474056 RHOP08100 348 aa19.38■□□□□ 0.69
UPF3A-203ENST00000474056 LMBRD2Q68DH5 695 aaPredicted RBP19.38■□□□□ 0.69
UPF3A-203ENST00000474056 SCARA3Q6AZY7 606 aa19.38■□□□□ 0.69
UPF3A-203ENST00000474056 FBXL6Q8N531 539 aa19.38■□□□□ 0.69
UPF3A-203ENST00000474056 C1orf127Q8N9H9 656 aa19.38■□□□□ 0.69
UPF3A-203ENST00000474056 SCFD1Q8WVM8 642 aa19.38■□□□□ 0.69
UPF3A-203ENST00000474056 PAGE5Q96GU1 130 aa19.38■□□□□ 0.69
UPF3A-203ENST00000474056 PGLYRP2Q96PD5 576 aa19.38■□□□□ 0.69
UPF3A-203ENST00000474056 SLC39A2Q9NP94 309 aa19.38■□□□□ 0.69
UPF3A-203ENST00000474056 HSPBP1Q9NZL4 362 aa19.38■□□□□ 0.69
UPF3A-203ENST00000474056 CDH7Q9ULB5 785 aa19.38■□□□□ 0.69
UPF3A-203ENST00000474056 OR6C75A6NL08 312 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms